Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1465

Experiment: m.b. 2-Furfuraldehyde 0.035 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1463 and B158DRAFT_1464 are separated by 9 nucleotidesB158DRAFT_1464 and B158DRAFT_1465 are separated by 25 nucleotidesB158DRAFT_1465 and B158DRAFT_1466 are separated by 120 nucleotidesB158DRAFT_1466 and B158DRAFT_1467 are separated by 216 nucleotidesB158DRAFT_1467 and B158DRAFT_1468 are separated by 84 nucleotides B158DRAFT_1463: B158DRAFT_1463 - Fe-S protein assembly chaperone HscA, at 1,515,632 to 1,517,485 _1463 B158DRAFT_1464: B158DRAFT_1464 - ferredoxin, 2Fe-2S type, ISC system, at 1,517,495 to 1,517,833 _1464 B158DRAFT_1465: B158DRAFT_1465 - FeS assembly protein IscX, at 1,517,859 to 1,518,053 _1465 B158DRAFT_1466: B158DRAFT_1466 - tRNA_Lys_TTT, at 1,518,174 to 1,518,249 _1466 B158DRAFT_1467: B158DRAFT_1467 - tRNA_Lys_TTT, at 1,518,466 to 1,518,541 _1467 B158DRAFT_1468: B158DRAFT_1468 - Predicted transcriptional regulators, at 1,518,626 to 1,519,354 _1468 Position (kb) 1517 1518 1519Strain fitness (log2 ratio) -2 -1 0 1 2at 1517.276 kb on + strand, within B158DRAFT_1463at 1517.887 kb on + strand, within B158DRAFT_1465at 1517.895 kb on - strand, within B158DRAFT_1465at 1517.895 kb on - strand, within B158DRAFT_1465at 1517.909 kb on + strand, within B158DRAFT_1465at 1517.983 kb on - strand, within B158DRAFT_1465at 1517.986 kb on + strand, within B158DRAFT_1465at 1517.993 kb on + strand, within B158DRAFT_1465at 1518.005 kb on + strand, within B158DRAFT_1465at 1518.011 kb on + strand, within B158DRAFT_1465at 1518.034 kb on + strandat 1518.034 kb on + strandat 1518.218 kb on + strand, within B158DRAFT_1466at 1518.259 kb on + strandat 1518.263 kb on + strandat 1518.269 kb on - strandat 1518.269 kb on - strandat 1518.517 kb on + strand, within B158DRAFT_1467at 1518.529 kb on + strand, within B158DRAFT_1467at 1518.564 kb on - strandat 1518.566 kb on - strandat 1518.671 kb on + strandat 1518.671 kb on + strandat 1518.671 kb on + strandat 1518.707 kb on + strand, within B158DRAFT_1468at 1518.727 kb on - strand, within B158DRAFT_1468at 1518.800 kb on - strand, within B158DRAFT_1468at 1518.805 kb on - strand, within B158DRAFT_1468at 1518.817 kb on - strand, within B158DRAFT_1468at 1518.818 kb on + strand, within B158DRAFT_1468at 1518.871 kb on + strand, within B158DRAFT_1468at 1518.886 kb on - strand, within B158DRAFT_1468at 1518.889 kb on + strand, within B158DRAFT_1468at 1518.950 kb on + strand, within B158DRAFT_1468at 1518.950 kb on + strand, within B158DRAFT_1468at 1518.958 kb on - strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.045 kb on - strand, within B158DRAFT_1468at 1519.045 kb on - strand, within B158DRAFT_1468

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 2-Furfuraldehyde 0.035 vol%
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1,517,276 + B158DRAFT_1463 0.89 -1.7
1,517,887 + B158DRAFT_1465 0.14 -0.9
1,517,895 - B158DRAFT_1465 0.18 -0.3
1,517,895 - B158DRAFT_1465 0.18 -0.9
1,517,909 + B158DRAFT_1465 0.26 -0.1
1,517,983 - B158DRAFT_1465 0.64 -2.3
1,517,986 + B158DRAFT_1465 0.65 -0.8
1,517,993 + B158DRAFT_1465 0.69 -0.7
1,518,005 + B158DRAFT_1465 0.75 -0.0
1,518,011 + B158DRAFT_1465 0.78 -0.2
1,518,034 + -0.3
1,518,034 + -0.2
1,518,218 + B158DRAFT_1466 0.58 -0.3
1,518,259 + -0.6
1,518,263 + +0.0
1,518,269 - +0.5
1,518,269 - +0.4
1,518,517 + B158DRAFT_1467 0.67 -0.2
1,518,529 + B158DRAFT_1467 0.83 +0.7
1,518,564 - +1.9
1,518,566 - -0.8
1,518,671 + +0.0
1,518,671 + +0.5
1,518,671 + +0.4
1,518,707 + B158DRAFT_1468 0.11 +0.1
1,518,727 - B158DRAFT_1468 0.14 +0.2
1,518,800 - B158DRAFT_1468 0.24 +0.2
1,518,805 - B158DRAFT_1468 0.25 -0.2
1,518,817 - B158DRAFT_1468 0.26 +0.4
1,518,818 + B158DRAFT_1468 0.26 +0.1
1,518,871 + B158DRAFT_1468 0.34 +0.2
1,518,886 - B158DRAFT_1468 0.36 -0.2
1,518,889 + B158DRAFT_1468 0.36 -0.3
1,518,950 + B158DRAFT_1468 0.44 -0.3
1,518,950 + B158DRAFT_1468 0.44 +0.4
1,518,958 - B158DRAFT_1468 0.46 +0.4
1,519,037 + B158DRAFT_1468 0.56 -0.1
1,519,037 + B158DRAFT_1468 0.56 +0.5
1,519,037 + B158DRAFT_1468 0.56 -0.8
1,519,037 + B158DRAFT_1468 0.56 -0.2
1,519,037 + B158DRAFT_1468 0.56 +0.0
1,519,037 + B158DRAFT_1468 0.56 +0.2
1,519,045 - B158DRAFT_1468 0.57 -1.1
1,519,045 - B158DRAFT_1468 0.57 -0.0

Or see this region's nucleotide sequence