Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0457

Experiment: m.b. 2-Furfuraldehyde 0.035 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0456 and B158DRAFT_0457 overlap by 1 nucleotidesB158DRAFT_0457 and B158DRAFT_0458 are separated by 4 nucleotidesB158DRAFT_0458 and B158DRAFT_0459 are separated by 8 nucleotides B158DRAFT_0456: B158DRAFT_0456 - Sugar (pentulose and hexulose) kinases, at 456,426 to 457,970 _0456 B158DRAFT_0457: B158DRAFT_0457 - Zn-dependent oligopeptidases, at 457,970 to 460,015 _0457 B158DRAFT_0458: B158DRAFT_0458 - cytidyltransferase-related domain, at 460,020 to 460,421 _0458 B158DRAFT_0459: B158DRAFT_0459 - Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC, at 460,430 to 461,485 _0459 Position (kb) 457 458 459 460 461Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 456.990 kb on + strand, within B158DRAFT_0456at 456.990 kb on + strand, within B158DRAFT_0456at 457.000 kb on + strand, within B158DRAFT_0456at 457.000 kb on + strand, within B158DRAFT_0456at 457.008 kb on - strand, within B158DRAFT_0456at 457.008 kb on - strand, within B158DRAFT_0456at 457.097 kb on + strand, within B158DRAFT_0456at 457.113 kb on - strand, within B158DRAFT_0456at 457.113 kb on - strand, within B158DRAFT_0456at 457.113 kb on - strand, within B158DRAFT_0456at 457.138 kb on - strand, within B158DRAFT_0456at 457.145 kb on + strand, within B158DRAFT_0456at 457.170 kb on + strand, within B158DRAFT_0456at 457.188 kb on + strand, within B158DRAFT_0456at 457.188 kb on + strand, within B158DRAFT_0456at 457.196 kb on - strand, within B158DRAFT_0456at 457.196 kb on - strand, within B158DRAFT_0456at 457.196 kb on - strand, within B158DRAFT_0456at 457.215 kb on + strand, within B158DRAFT_0456at 457.215 kb on + strand, within B158DRAFT_0456at 457.223 kb on - strand, within B158DRAFT_0456at 457.230 kb on + strand, within B158DRAFT_0456at 457.248 kb on + strand, within B158DRAFT_0456at 457.249 kb on - strand, within B158DRAFT_0456at 457.272 kb on - strand, within B158DRAFT_0456at 457.319 kb on + strand, within B158DRAFT_0456at 457.332 kb on - strand, within B158DRAFT_0456at 457.352 kb on - strand, within B158DRAFT_0456at 457.538 kb on + strand, within B158DRAFT_0456at 457.538 kb on + strand, within B158DRAFT_0456at 457.600 kb on + strand, within B158DRAFT_0456at 457.610 kb on + strand, within B158DRAFT_0456at 457.610 kb on + strand, within B158DRAFT_0456at 457.610 kb on + strand, within B158DRAFT_0456at 457.615 kb on + strand, within B158DRAFT_0456at 457.618 kb on - strand, within B158DRAFT_0456at 457.618 kb on - strand, within B158DRAFT_0456at 457.627 kb on + strand, within B158DRAFT_0456at 457.627 kb on + strand, within B158DRAFT_0456at 457.633 kb on + strand, within B158DRAFT_0456at 457.635 kb on - strand, within B158DRAFT_0456at 457.641 kb on - strand, within B158DRAFT_0456at 457.661 kb on - strand, within B158DRAFT_0456at 457.661 kb on - strand, within B158DRAFT_0456at 457.663 kb on + strand, within B158DRAFT_0456at 457.680 kb on + strand, within B158DRAFT_0456at 457.688 kb on + strand, within B158DRAFT_0456at 457.688 kb on - strand, within B158DRAFT_0456at 457.725 kb on - strand, within B158DRAFT_0456at 457.727 kb on - strand, within B158DRAFT_0456at 457.753 kb on - strand, within B158DRAFT_0456at 457.770 kb on + strand, within B158DRAFT_0456at 457.792 kb on - strand, within B158DRAFT_0456at 457.792 kb on - strand, within B158DRAFT_0456at 457.800 kb on + strand, within B158DRAFT_0456at 457.803 kb on - strand, within B158DRAFT_0456at 457.827 kb on + strandat 457.832 kb on + strandat 457.840 kb on - strandat 457.863 kb on + strandat 457.898 kb on - strandat 457.899 kb on - strandat 458.000 kb on + strandat 458.000 kb on + strandat 458.008 kb on - strandat 458.061 kb on - strandat 458.061 kb on - strandat 458.220 kb on - strand, within B158DRAFT_0457at 458.233 kb on + strand, within B158DRAFT_0457at 458.233 kb on + strand, within B158DRAFT_0457at 458.241 kb on - strand, within B158DRAFT_0457at 458.298 kb on + strand, within B158DRAFT_0457at 458.298 kb on + strand, within B158DRAFT_0457at 458.306 kb on - strand, within B158DRAFT_0457at 458.306 kb on - strand, within B158DRAFT_0457at 458.351 kb on + strand, within B158DRAFT_0457at 458.357 kb on - strand, within B158DRAFT_0457at 458.370 kb on - strand, within B158DRAFT_0457at 458.377 kb on - strand, within B158DRAFT_0457at 458.390 kb on + strand, within B158DRAFT_0457at 458.432 kb on + strand, within B158DRAFT_0457at 458.440 kb on - strand, within B158DRAFT_0457at 458.440 kb on - strand, within B158DRAFT_0457at 458.540 kb on + strand, within B158DRAFT_0457at 458.562 kb on + strand, within B158DRAFT_0457at 458.584 kb on + strand, within B158DRAFT_0457at 458.585 kb on + strand, within B158DRAFT_0457at 458.585 kb on + strand, within B158DRAFT_0457at 458.593 kb on - strand, within B158DRAFT_0457at 458.609 kb on + strand, within B158DRAFT_0457at 458.617 kb on - strand, within B158DRAFT_0457at 458.664 kb on - strand, within B158DRAFT_0457at 458.839 kb on + strand, within B158DRAFT_0457at 458.839 kb on + strand, within B158DRAFT_0457at 458.872 kb on + strand, within B158DRAFT_0457at 458.872 kb on + strand, within B158DRAFT_0457at 458.872 kb on + strand, within B158DRAFT_0457at 458.880 kb on - strand, within B158DRAFT_0457at 458.880 kb on - strand, within B158DRAFT_0457at 458.880 kb on - strand, within B158DRAFT_0457at 458.891 kb on + strand, within B158DRAFT_0457at 459.012 kb on + strand, within B158DRAFT_0457at 459.028 kb on + strand, within B158DRAFT_0457at 459.028 kb on + strand, within B158DRAFT_0457at 459.028 kb on + strand, within B158DRAFT_0457at 459.033 kb on + strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.078 kb on + strand, within B158DRAFT_0457at 459.078 kb on + strand, within B158DRAFT_0457at 459.086 kb on - strand, within B158DRAFT_0457at 459.158 kb on + strand, within B158DRAFT_0457at 459.172 kb on - strand, within B158DRAFT_0457at 459.206 kb on + strand, within B158DRAFT_0457at 459.214 kb on - strand, within B158DRAFT_0457at 459.300 kb on + strand, within B158DRAFT_0457at 459.300 kb on + strand, within B158DRAFT_0457at 459.300 kb on + strand, within B158DRAFT_0457at 459.308 kb on - strand, within B158DRAFT_0457at 459.308 kb on - strand, within B158DRAFT_0457at 459.308 kb on - strand, within B158DRAFT_0457at 459.319 kb on + strand, within B158DRAFT_0457at 459.327 kb on - strand, within B158DRAFT_0457at 459.383 kb on + strand, within B158DRAFT_0457at 459.418 kb on - strand, within B158DRAFT_0457at 459.464 kb on + strand, within B158DRAFT_0457at 459.472 kb on - strand, within B158DRAFT_0457at 459.529 kb on - strand, within B158DRAFT_0457at 459.575 kb on + strand, within B158DRAFT_0457at 459.575 kb on + strand, within B158DRAFT_0457at 459.578 kb on - strand, within B158DRAFT_0457at 459.580 kb on + strand, within B158DRAFT_0457at 459.588 kb on - strand, within B158DRAFT_0457at 459.593 kb on - strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.637 kb on - strand, within B158DRAFT_0457at 459.642 kb on - strand, within B158DRAFT_0457at 459.660 kb on + strand, within B158DRAFT_0457at 459.674 kb on + strand, within B158DRAFT_0457at 459.696 kb on - strand, within B158DRAFT_0457at 459.701 kb on + strand, within B158DRAFT_0457at 459.749 kb on + strand, within B158DRAFT_0457at 459.749 kb on + strand, within B158DRAFT_0457at 459.749 kb on + strand, within B158DRAFT_0457at 459.757 kb on - strand, within B158DRAFT_0457at 459.774 kb on - strand, within B158DRAFT_0457at 459.910 kb on + strandat 459.910 kb on + strandat 459.918 kb on - strandat 459.918 kb on - strandat 459.918 kb on - strandat 459.918 kb on - strandat 460.038 kb on - strandat 460.233 kb on + strand, within B158DRAFT_0458at 460.233 kb on + strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.330 kb on - strand, within B158DRAFT_0458at 460.334 kb on + strand, within B158DRAFT_0458at 460.391 kb on + strandat 460.399 kb on + strandat 460.428 kb on + strandat 460.503 kb on + strandat 460.536 kb on + strand, within B158DRAFT_0459at 460.611 kb on + strand, within B158DRAFT_0459at 460.732 kb on + strand, within B158DRAFT_0459at 460.787 kb on + strand, within B158DRAFT_0459at 460.795 kb on - strand, within B158DRAFT_0459at 460.833 kb on - strand, within B158DRAFT_0459at 460.833 kb on - strand, within B158DRAFT_0459at 460.877 kb on - strand, within B158DRAFT_0459at 460.893 kb on + strand, within B158DRAFT_0459at 460.929 kb on + strand, within B158DRAFT_0459

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 2-Furfuraldehyde 0.035 vol%
remove
456,990 + B158DRAFT_0456 0.37 +0.4
456,990 + B158DRAFT_0456 0.37 +0.3
457,000 + B158DRAFT_0456 0.37 +0.0
457,000 + B158DRAFT_0456 0.37 +0.2
457,008 - B158DRAFT_0456 0.38 +0.5
457,008 - B158DRAFT_0456 0.38 -1.0
457,097 + B158DRAFT_0456 0.43 -2.4
457,113 - B158DRAFT_0456 0.44 +0.1
457,113 - B158DRAFT_0456 0.44 -0.4
457,113 - B158DRAFT_0456 0.44 +0.0
457,138 - B158DRAFT_0456 0.46 -0.7
457,145 + B158DRAFT_0456 0.47 -0.2
457,170 + B158DRAFT_0456 0.48 +0.0
457,188 + B158DRAFT_0456 0.49 +0.4
457,188 + B158DRAFT_0456 0.49 -0.7
457,196 - B158DRAFT_0456 0.50 +0.9
457,196 - B158DRAFT_0456 0.50 +0.1
457,196 - B158DRAFT_0456 0.50 +0.0
457,215 + B158DRAFT_0456 0.51 -0.6
457,215 + B158DRAFT_0456 0.51 -0.2
457,223 - B158DRAFT_0456 0.52 -0.1
457,230 + B158DRAFT_0456 0.52 -0.1
457,248 + B158DRAFT_0456 0.53 +0.3
457,249 - B158DRAFT_0456 0.53 -0.3
457,272 - B158DRAFT_0456 0.55 +0.1
457,319 + B158DRAFT_0456 0.58 +0.1
457,332 - B158DRAFT_0456 0.59 +0.1
457,352 - B158DRAFT_0456 0.60 +0.1
457,538 + B158DRAFT_0456 0.72 +0.6
457,538 + B158DRAFT_0456 0.72 +0.0
457,600 + B158DRAFT_0456 0.76 -0.1
457,610 + B158DRAFT_0456 0.77 +0.2
457,610 + B158DRAFT_0456 0.77 -0.3
457,610 + B158DRAFT_0456 0.77 -0.1
457,615 + B158DRAFT_0456 0.77 +0.0
457,618 - B158DRAFT_0456 0.77 -0.7
457,618 - B158DRAFT_0456 0.77 -0.4
457,627 + B158DRAFT_0456 0.78 +0.5
457,627 + B158DRAFT_0456 0.78 -0.7
457,633 + B158DRAFT_0456 0.78 +0.4
457,635 - B158DRAFT_0456 0.78 -0.1
457,641 - B158DRAFT_0456 0.79 +0.3
457,661 - B158DRAFT_0456 0.80 +0.2
457,661 - B158DRAFT_0456 0.80 -1.3
457,663 + B158DRAFT_0456 0.80 +1.2
457,680 + B158DRAFT_0456 0.81 -0.3
457,688 + B158DRAFT_0456 0.82 +0.1
457,688 - B158DRAFT_0456 0.82 +0.4
457,725 - B158DRAFT_0456 0.84 +0.0
457,727 - B158DRAFT_0456 0.84 +0.2
457,753 - B158DRAFT_0456 0.86 -0.1
457,770 + B158DRAFT_0456 0.87 +0.4
457,792 - B158DRAFT_0456 0.88 -0.2
457,792 - B158DRAFT_0456 0.88 +0.2
457,800 + B158DRAFT_0456 0.89 -0.2
457,803 - B158DRAFT_0456 0.89 -0.0
457,827 + -0.8
457,832 + -1.5
457,840 - +0.1
457,863 + -0.5
457,898 - +0.2
457,899 - -0.8
458,000 + -0.4
458,000 + +0.2
458,008 - -0.4
458,061 - +0.0
458,061 - +0.6
458,220 - B158DRAFT_0457 0.12 +0.6
458,233 + B158DRAFT_0457 0.13 -0.2
458,233 + B158DRAFT_0457 0.13 +0.5
458,241 - B158DRAFT_0457 0.13 +0.1
458,298 + B158DRAFT_0457 0.16 -0.4
458,298 + B158DRAFT_0457 0.16 +0.2
458,306 - B158DRAFT_0457 0.16 -0.2
458,306 - B158DRAFT_0457 0.16 +0.0
458,351 + B158DRAFT_0457 0.19 +0.4
458,357 - B158DRAFT_0457 0.19 +2.6
458,370 - B158DRAFT_0457 0.20 +0.4
458,377 - B158DRAFT_0457 0.20 -0.3
458,390 + B158DRAFT_0457 0.21 +0.3
458,432 + B158DRAFT_0457 0.23 +0.4
458,440 - B158DRAFT_0457 0.23 -0.1
458,440 - B158DRAFT_0457 0.23 -0.9
458,540 + B158DRAFT_0457 0.28 +0.0
458,562 + B158DRAFT_0457 0.29 -0.1
458,584 + B158DRAFT_0457 0.30 +0.2
458,585 + B158DRAFT_0457 0.30 -0.0
458,585 + B158DRAFT_0457 0.30 +0.0
458,593 - B158DRAFT_0457 0.30 +0.1
458,609 + B158DRAFT_0457 0.31 -0.0
458,617 - B158DRAFT_0457 0.32 -0.2
458,664 - B158DRAFT_0457 0.34 +0.7
458,839 + B158DRAFT_0457 0.42 +0.2
458,839 + B158DRAFT_0457 0.42 +0.3
458,872 + B158DRAFT_0457 0.44 -0.3
458,872 + B158DRAFT_0457 0.44 -0.1
458,872 + B158DRAFT_0457 0.44 +0.2
458,880 - B158DRAFT_0457 0.44 +0.7
458,880 - B158DRAFT_0457 0.44 +0.5
458,880 - B158DRAFT_0457 0.44 +0.3
458,891 + B158DRAFT_0457 0.45 -1.0
459,012 + B158DRAFT_0457 0.51 -0.5
459,028 + B158DRAFT_0457 0.52 -0.3
459,028 + B158DRAFT_0457 0.52 +0.2
459,028 + B158DRAFT_0457 0.52 -0.1
459,033 + B158DRAFT_0457 0.52 +0.1
459,036 - B158DRAFT_0457 0.52 +0.4
459,036 - B158DRAFT_0457 0.52 +0.4
459,036 - B158DRAFT_0457 0.52 +0.2
459,036 - B158DRAFT_0457 0.52 -0.2
459,036 - B158DRAFT_0457 0.52 +0.6
459,036 - B158DRAFT_0457 0.52 -0.1
459,036 - B158DRAFT_0457 0.52 +0.4
459,078 + B158DRAFT_0457 0.54 -0.1
459,078 + B158DRAFT_0457 0.54 +2.0
459,086 - B158DRAFT_0457 0.55 -0.3
459,158 + B158DRAFT_0457 0.58 +0.0
459,172 - B158DRAFT_0457 0.59 +0.3
459,206 + B158DRAFT_0457 0.60 -0.0
459,214 - B158DRAFT_0457 0.61 -0.7
459,300 + B158DRAFT_0457 0.65 -0.3
459,300 + B158DRAFT_0457 0.65 +0.1
459,300 + B158DRAFT_0457 0.65 -0.1
459,308 - B158DRAFT_0457 0.65 -0.2
459,308 - B158DRAFT_0457 0.65 -0.1
459,308 - B158DRAFT_0457 0.65 -0.5
459,319 + B158DRAFT_0457 0.66 -1.5
459,327 - B158DRAFT_0457 0.66 +0.9
459,383 + B158DRAFT_0457 0.69 +0.2
459,418 - B158DRAFT_0457 0.71 +0.0
459,464 + B158DRAFT_0457 0.73 +0.8
459,472 - B158DRAFT_0457 0.73 +0.0
459,529 - B158DRAFT_0457 0.76 +0.0
459,575 + B158DRAFT_0457 0.78 -0.6
459,575 + B158DRAFT_0457 0.78 -0.2
459,578 - B158DRAFT_0457 0.79 +0.3
459,580 + B158DRAFT_0457 0.79 -0.5
459,588 - B158DRAFT_0457 0.79 +0.5
459,593 - B158DRAFT_0457 0.79 -0.4
459,595 + B158DRAFT_0457 0.79 -0.3
459,595 + B158DRAFT_0457 0.79 +0.2
459,595 + B158DRAFT_0457 0.79 -0.0
459,595 + B158DRAFT_0457 0.79 -0.0
459,595 + B158DRAFT_0457 0.79 +0.1
459,595 + B158DRAFT_0457 0.79 +0.3
459,595 + B158DRAFT_0457 0.79 +0.3
459,603 - B158DRAFT_0457 0.80 -1.0
459,603 - B158DRAFT_0457 0.80 +0.3
459,603 - B158DRAFT_0457 0.80 +0.6
459,603 - B158DRAFT_0457 0.80 -0.1
459,603 - B158DRAFT_0457 0.80 +0.2
459,603 - B158DRAFT_0457 0.80 +0.4
459,603 - B158DRAFT_0457 0.80 -0.2
459,603 - B158DRAFT_0457 0.80 -0.2
459,603 - B158DRAFT_0457 0.80 +0.4
459,603 - B158DRAFT_0457 0.80 -0.2
459,603 - B158DRAFT_0457 0.80 +0.7
459,603 - B158DRAFT_0457 0.80 +1.0
459,603 - B158DRAFT_0457 0.80 +0.2
459,603 - B158DRAFT_0457 0.80 +1.3
459,637 - B158DRAFT_0457 0.81 +0.1
459,642 - B158DRAFT_0457 0.82 +0.7
459,660 + B158DRAFT_0457 0.83 -0.4
459,674 + B158DRAFT_0457 0.83 +0.3
459,696 - B158DRAFT_0457 0.84 +0.0
459,701 + B158DRAFT_0457 0.85 +0.0
459,749 + B158DRAFT_0457 0.87 +0.1
459,749 + B158DRAFT_0457 0.87 +0.0
459,749 + B158DRAFT_0457 0.87 -0.3
459,757 - B158DRAFT_0457 0.87 -1.0
459,774 - B158DRAFT_0457 0.88 -0.2
459,910 + +0.3
459,910 + -0.6
459,918 - -1.6
459,918 - +0.3
459,918 - -0.6
459,918 - +1.2
460,038 - -2.0
460,233 + B158DRAFT_0458 0.53 -1.2
460,233 + B158DRAFT_0458 0.53 -2.8
460,241 - B158DRAFT_0458 0.55 -1.5
460,241 - B158DRAFT_0458 0.55 -2.3
460,241 - B158DRAFT_0458 0.55 -0.8
460,241 - B158DRAFT_0458 0.55 -2.2
460,330 - B158DRAFT_0458 0.77 -1.8
460,334 + B158DRAFT_0458 0.78 -1.7
460,391 + -1.1
460,399 + -1.3
460,428 + -0.9
460,503 + -2.1
460,536 + B158DRAFT_0459 0.10 -2.3
460,611 + B158DRAFT_0459 0.17 -1.1
460,732 + B158DRAFT_0459 0.29 -0.4
460,787 + B158DRAFT_0459 0.34 -2.0
460,795 - B158DRAFT_0459 0.35 -0.3
460,833 - B158DRAFT_0459 0.38 -0.6
460,833 - B158DRAFT_0459 0.38 -0.1
460,877 - B158DRAFT_0459 0.42 +0.0
460,893 + B158DRAFT_0459 0.44 -1.5
460,929 + B158DRAFT_0459 0.47 -1.2

Or see this region's nucleotide sequence