Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0165

Experiment: m.b. 2-Furfuraldehyde 0.035 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0164 and B158DRAFT_0165 overlap by 4 nucleotidesB158DRAFT_0165 and B158DRAFT_0166 are separated by 62 nucleotides B158DRAFT_0164: B158DRAFT_0164 - tRNA-U20-dihydrouridine synthase, at 161,256 to 162,236 _0164 B158DRAFT_0165: B158DRAFT_0165 - Factor for inversion stimulation Fis, transcriptional activator, at 162,233 to 162,538 _0165 B158DRAFT_0166: B158DRAFT_0166 - IMP cyclohydrolase (EC 3.5.4.10)/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3), at 162,601 to 164,166 _0166 Position (kb) 162 163Strain fitness (log2 ratio) -3 -2 -1 0 1at 161.261 kb on + strandat 161.358 kb on + strand, within B158DRAFT_0164at 161.358 kb on + strand, within B158DRAFT_0164at 161.460 kb on + strand, within B158DRAFT_0164at 161.492 kb on + strand, within B158DRAFT_0164at 161.492 kb on + strand, within B158DRAFT_0164at 161.605 kb on + strand, within B158DRAFT_0164at 161.655 kb on + strand, within B158DRAFT_0164at 161.655 kb on + strand, within B158DRAFT_0164at 161.699 kb on + strand, within B158DRAFT_0164at 161.699 kb on + strand, within B158DRAFT_0164at 161.699 kb on + strand, within B158DRAFT_0164at 161.699 kb on + strand, within B158DRAFT_0164at 161.859 kb on + strand, within B158DRAFT_0164at 161.894 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 161.939 kb on + strand, within B158DRAFT_0164at 162.010 kb on + strand, within B158DRAFT_0164at 162.172 kb on + strandat 162.221 kb on + strandat 162.533 kb on + strandat 162.551 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 2-Furfuraldehyde 0.035 vol%
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161,261 + -2.5
161,358 + B158DRAFT_0164 0.10 -1.1
161,358 + B158DRAFT_0164 0.10 -1.4
161,460 + B158DRAFT_0164 0.21 -1.5
161,492 + B158DRAFT_0164 0.24 -1.8
161,492 + B158DRAFT_0164 0.24 -3.4
161,605 + B158DRAFT_0164 0.36 -1.6
161,655 + B158DRAFT_0164 0.41 -1.3
161,655 + B158DRAFT_0164 0.41 -1.4
161,699 + B158DRAFT_0164 0.45 -1.8
161,699 + B158DRAFT_0164 0.45 -2.5
161,699 + B158DRAFT_0164 0.45 -2.5
161,699 + B158DRAFT_0164 0.45 +0.0
161,859 + B158DRAFT_0164 0.61 -2.4
161,894 + B158DRAFT_0164 0.65 -1.4
161,939 + B158DRAFT_0164 0.70 -1.8
161,939 + B158DRAFT_0164 0.70 -1.8
161,939 + B158DRAFT_0164 0.70 -0.6
161,939 + B158DRAFT_0164 0.70 -2.8
161,939 + B158DRAFT_0164 0.70 -1.8
161,939 + B158DRAFT_0164 0.70 -1.9
161,939 + B158DRAFT_0164 0.70 -2.9
161,939 + B158DRAFT_0164 0.70 -3.1
161,939 + B158DRAFT_0164 0.70 +1.6
162,010 + B158DRAFT_0164 0.77 -2.6
162,172 + -1.5
162,221 + -1.0
162,533 + +0.0
162,551 + -2.4

Or see this region's nucleotide sequence