Experiment: 6-methoxy-2(3H)-benzoxazolone 1.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15855 and PS417_15860 are separated by 214 nucleotides PS417_15860 and PS417_15865 are separated by 387 nucleotides PS417_15865 and PS417_15870 overlap by 11 nucleotides
PS417_15855: PS417_15855 - universal stress protein, at 3,472,535 to 3,473,461
_15855
PS417_15860: PS417_15860 - chromate transporter, at 3,473,676 to 3,474,881
_15860
PS417_15865: PS417_15865 - hypothetical protein, at 3,475,269 to 3,475,604
_15865
PS417_15870: PS417_15870 - histidine kinase, at 3,475,594 to 3,477,207
_15870
Position (kb)
3473
3474
3475 Strain fitness (log2 ratio)
-1
0
1 at 3472.927 kb on + strand, within PS417_15855 at 3473.040 kb on - strand, within PS417_15855 at 3473.095 kb on + strand, within PS417_15855 at 3473.096 kb on - strand, within PS417_15855 at 3473.096 kb on - strand, within PS417_15855 at 3473.114 kb on - strand, within PS417_15855 at 3473.114 kb on - strand, within PS417_15855 at 3473.251 kb on + strand, within PS417_15855 at 3473.324 kb on + strand, within PS417_15855 at 3473.324 kb on + strand, within PS417_15855 at 3473.325 kb on - strand, within PS417_15855 at 3473.339 kb on - strand, within PS417_15855 at 3473.339 kb on - strand, within PS417_15855 at 3473.511 kb on + strand at 3473.652 kb on + strand at 3473.829 kb on + strand, within PS417_15860 at 3473.860 kb on + strand, within PS417_15860 at 3473.861 kb on - strand, within PS417_15860 at 3474.025 kb on + strand, within PS417_15860 at 3474.113 kb on + strand, within PS417_15860 at 3474.184 kb on + strand, within PS417_15860 at 3474.415 kb on + strand, within PS417_15860 at 3474.415 kb on + strand, within PS417_15860 at 3474.415 kb on + strand, within PS417_15860 at 3474.442 kb on + strand, within PS417_15860 at 3474.729 kb on + strand, within PS417_15860 at 3474.877 kb on + strand at 3474.880 kb on - strand at 3474.957 kb on - strand at 3475.168 kb on + strand at 3475.169 kb on - strand at 3475.169 kb on - strand at 3475.169 kb on - strand at 3475.353 kb on - strand at 3475.420 kb on + strand, within PS417_15865 at 3475.443 kb on + strand, within PS417_15865 at 3475.443 kb on + strand, within PS417_15865 at 3475.444 kb on - strand, within PS417_15865 at 3475.446 kb on + strand, within PS417_15865 at 3475.446 kb on + strand, within PS417_15865 at 3475.447 kb on - strand, within PS417_15865 at 3475.447 kb on - strand, within PS417_15865 at 3475.474 kb on - strand, within PS417_15865
Per-strain Table
Position Strand Gene LocusTag Fraction 6-methoxy-2(3H)-benzoxazolone 1.2 mM remove 3,472,927 + PS417_15855 0.42 +0.1 3,473,040 - PS417_15855 0.54 +0.5 3,473,095 + PS417_15855 0.60 +0.2 3,473,096 - PS417_15855 0.61 -0.7 3,473,096 - PS417_15855 0.61 -1.4 3,473,114 - PS417_15855 0.62 -0.4 3,473,114 - PS417_15855 0.62 +0.0 3,473,251 + PS417_15855 0.77 -1.2 3,473,324 + PS417_15855 0.85 -0.1 3,473,324 + PS417_15855 0.85 +0.1 3,473,325 - PS417_15855 0.85 -0.1 3,473,339 - PS417_15855 0.87 +0.1 3,473,339 - PS417_15855 0.87 -0.4 3,473,511 + -0.4 3,473,652 + -1.4 3,473,829 + PS417_15860 0.13 -0.6 3,473,860 + PS417_15860 0.15 -0.9 3,473,861 - PS417_15860 0.15 -0.8 3,474,025 + PS417_15860 0.29 -0.2 3,474,113 + PS417_15860 0.36 +0.9 3,474,184 + PS417_15860 0.42 -0.8 3,474,415 + PS417_15860 0.61 -0.3 3,474,415 + PS417_15860 0.61 +0.2 3,474,415 + PS417_15860 0.61 -0.4 3,474,442 + PS417_15860 0.64 -0.7 3,474,729 + PS417_15860 0.87 -0.2 3,474,877 + -0.1 3,474,880 - -1.2 3,474,957 - +0.8 3,475,168 + +0.1 3,475,169 - -0.3 3,475,169 - +0.2 3,475,169 - -0.0 3,475,353 - +0.5 3,475,420 + PS417_15865 0.45 +0.5 3,475,443 + PS417_15865 0.52 -0.8 3,475,443 + PS417_15865 0.52 -1.2 3,475,444 - PS417_15865 0.52 -0.2 3,475,446 + PS417_15865 0.53 -0.6 3,475,446 + PS417_15865 0.53 -0.3 3,475,447 - PS417_15865 0.53 -0.0 3,475,447 - PS417_15865 0.53 -0.8 3,475,474 - PS417_15865 0.61 -0.7
Or see this region's nucleotide sequence