Experiment: LB_noSalt with Chloride 1100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03215 and PS417_03220 are separated by 184 nucleotides PS417_03220 and PS417_03225 are separated by 35 nucleotides PS417_03225 and PS417_03230 are separated by 12 nucleotides PS417_03230 and PS417_03235 are separated by 87 nucleotides
PS417_03215: PS417_03215 - 8-oxoguanine deaminase, at 734,907 to 736,262
_03215
PS417_03220: PS417_03220 - short-chain dehydrogenase, at 736,447 to 737,133
_03220
PS417_03225: PS417_03225 - thymidylate synthase, at 737,169 to 737,750
_03225
PS417_03230: PS417_03230 - TetR family transcriptional regulator, at 737,763 to 738,422
_03230
PS417_03235: PS417_03235 - xanthine permease XanP, at 738,510 to 739,904
_03235
Position (kb) 737
738 Strain fitness (log2 ratio) -2
-1
0
1 at 736.358 kb on + strand at 736.358 kb on + strand at 736.358 kb on + strand at 736.358 kb on + strand at 736.364 kb on + strand at 736.364 kb on + strand at 736.364 kb on + strand at 736.381 kb on + strand at 736.381 kb on + strand at 736.382 kb on - strand at 736.388 kb on - strand at 736.432 kb on - strand at 736.448 kb on + strand at 736.505 kb on + strand at 736.506 kb on - strand at 736.685 kb on + strand, within PS417_03220 at 736.686 kb on - strand at 737.179 kb on - strand at 737.231 kb on + strand, within PS417_03225 at 737.231 kb on + strand, within PS417_03225 at 737.232 kb on - strand, within PS417_03225 at 737.232 kb on - strand, within PS417_03225 at 737.232 kb on - strand, within PS417_03225 at 737.232 kb on - strand at 737.412 kb on - strand, within PS417_03225 at 737.412 kb on - strand, within PS417_03225 at 737.530 kb on - strand, within PS417_03225 at 737.688 kb on - strand, within PS417_03225 at 737.688 kb on - strand, within PS417_03225 at 737.706 kb on + strand at 737.750 kb on + strand at 737.751 kb on - strand at 737.813 kb on + strand at 737.893 kb on + strand, within PS417_03230 at 738.197 kb on + strand, within PS417_03230 at 738.197 kb on + strand, within PS417_03230 at 738.198 kb on - strand, within PS417_03230 at 738.212 kb on + strand, within PS417_03230 at 738.212 kb on + strand, within PS417_03230 at 738.214 kb on + strand, within PS417_03230 at 738.214 kb on + strand, within PS417_03230 at 738.214 kb on + strand, within PS417_03230 at 738.215 kb on - strand, within PS417_03230 at 738.238 kb on + strand, within PS417_03230 at 738.239 kb on - strand at 738.239 kb on - strand, within PS417_03230 at 738.241 kb on + strand, within PS417_03230 at 738.241 kb on + strand, within PS417_03230 at 738.241 kb on + strand, within PS417_03230 at 738.241 kb on + strand, within PS417_03230 at 738.241 kb on + strand, within PS417_03230 at 738.242 kb on - strand, within PS417_03230 at 738.242 kb on - strand, within PS417_03230 at 738.463 kb on + strand at 738.502 kb on + strand at 738.582 kb on + strand at 738.659 kb on + strand, within PS417_03235
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 1100 mM remove 736,358 + -0.7 736,358 + -0.4 736,358 + -0.4 736,358 + +0.1 736,364 + -0.1 736,364 + +0.3 736,364 + +0.6 736,381 + -0.8 736,381 + +0.5 736,382 - -0.4 736,388 - +0.1 736,432 - +0.6 736,448 + -0.2 736,505 + -0.6 736,506 - +0.1 736,685 + PS417_03220 0.35 -0.3 736,686 - +0.3 737,179 - -1.3 737,231 + PS417_03225 0.11 +0.1 737,231 + PS417_03225 0.11 -0.1 737,232 - PS417_03225 0.11 +0.2 737,232 - PS417_03225 0.11 +0.5 737,232 - PS417_03225 0.11 +0.5 737,232 - -0.2 737,412 - PS417_03225 0.42 -2.2 737,412 - PS417_03225 0.42 +1.7 737,530 - PS417_03225 0.62 +0.6 737,688 - PS417_03225 0.89 +0.9 737,688 - PS417_03225 0.89 +0.6 737,706 + +0.0 737,750 + +0.3 737,751 - +0.7 737,813 + -0.8 737,893 + PS417_03230 0.20 +1.1 738,197 + PS417_03230 0.66 +0.2 738,197 + PS417_03230 0.66 +0.1 738,198 - PS417_03230 0.66 +0.0 738,212 + PS417_03230 0.68 +0.6 738,212 + PS417_03230 0.68 -1.1 738,214 + PS417_03230 0.68 +0.1 738,214 + PS417_03230 0.68 +0.1 738,214 + PS417_03230 0.68 +0.9 738,215 - PS417_03230 0.68 +0.9 738,238 + PS417_03230 0.72 +1.0 738,239 - -0.1 738,239 - PS417_03230 0.72 -0.1 738,241 + PS417_03230 0.72 -1.0 738,241 + PS417_03230 0.72 -0.5 738,241 + PS417_03230 0.72 +0.4 738,241 + PS417_03230 0.72 +0.3 738,241 + PS417_03230 0.72 +0.1 738,242 - PS417_03230 0.73 -0.4 738,242 - PS417_03230 0.73 +0.1 738,463 + +0.2 738,502 + +0.0 738,582 + +0.3 738,659 + PS417_03235 0.11 -0.5
Or see this region's nucleotide sequence