Experiment: LB_noSalt with Chloride 1100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00280 and PS417_00285 are separated by 227 nucleotides PS417_00285 and PS417_00290 are separated by 85 nucleotides
PS417_00280: PS417_00280 - radical SAM protein, at 54,309 to 55,367
_00280
PS417_00285: PS417_00285 - carbonate dehydratase, at 55,595 to 56,326
_00285
PS417_00290: PS417_00290 - SulP family inorganic anion transporter, at 56,412 to 57,959
_00290
Position (kb) 55
56
57 Strain fitness (log2 ratio) -1
0
1 at 54.666 kb on + strand, within PS417_00280 at 54.666 kb on + strand, within PS417_00280 at 54.666 kb on + strand, within PS417_00280 at 54.667 kb on - strand, within PS417_00280 at 54.667 kb on - strand, within PS417_00280 at 54.730 kb on - strand, within PS417_00280 at 55.077 kb on + strand, within PS417_00280 at 55.077 kb on + strand, within PS417_00280 at 55.200 kb on + strand, within PS417_00280 at 55.200 kb on + strand, within PS417_00280 at 55.201 kb on - strand, within PS417_00280 at 55.201 kb on - strand at 55.272 kb on - strand at 55.314 kb on - strand at 55.365 kb on + strand at 55.525 kb on + strand at 55.526 kb on - strand at 55.526 kb on - strand at 55.526 kb on - strand at 55.577 kb on + strand at 55.610 kb on - strand at 55.939 kb on - strand, within PS417_00285 at 55.939 kb on - strand, within PS417_00285 at 56.196 kb on + strand, within PS417_00285 at 56.196 kb on + strand, within PS417_00285 at 56.201 kb on - strand, within PS417_00285 at 56.201 kb on - strand, within PS417_00285 at 56.201 kb on - strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.324 kb on + strand at 56.437 kb on + strand at 56.763 kb on + strand, within PS417_00290 at 56.763 kb on + strand, within PS417_00290 at 56.764 kb on - strand, within PS417_00290 at 56.764 kb on - strand, within PS417_00290 at 56.768 kb on + strand, within PS417_00290 at 56.769 kb on - strand, within PS417_00290 at 56.801 kb on - strand, within PS417_00290 at 56.958 kb on + strand, within PS417_00290 at 56.959 kb on - strand, within PS417_00290 at 56.959 kb on - strand, within PS417_00290 at 57.019 kb on + strand, within PS417_00290 at 57.020 kb on - strand, within PS417_00290
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 1100 mM remove 54,666 + PS417_00280 0.34 -0.0 54,666 + PS417_00280 0.34 -0.2 54,666 + PS417_00280 0.34 -0.1 54,667 - PS417_00280 0.34 -1.2 54,667 - PS417_00280 0.34 +0.0 54,730 - PS417_00280 0.40 +0.5 55,077 + PS417_00280 0.73 -0.1 55,077 + PS417_00280 0.73 -0.3 55,200 + PS417_00280 0.84 +0.3 55,200 + PS417_00280 0.84 -0.3 55,201 - PS417_00280 0.84 -0.2 55,201 - +0.7 55,272 - +0.4 55,314 - +0.1 55,365 + +0.1 55,525 + -0.5 55,526 - +0.3 55,526 - +1.0 55,526 - +0.4 55,577 + -1.1 55,610 - -0.0 55,939 - PS417_00285 0.47 +0.1 55,939 - PS417_00285 0.47 -0.6 56,196 + PS417_00285 0.82 -0.4 56,196 + PS417_00285 0.82 +0.8 56,201 - PS417_00285 0.83 +0.3 56,201 - PS417_00285 0.83 -0.1 56,201 - PS417_00285 0.83 +0.4 56,216 + PS417_00285 0.85 -0.3 56,216 + PS417_00285 0.85 +0.2 56,216 + PS417_00285 0.85 -0.2 56,216 + PS417_00285 0.85 +0.1 56,324 + -0.5 56,437 + -0.0 56,763 + PS417_00290 0.23 -0.5 56,763 + PS417_00290 0.23 -0.3 56,764 - PS417_00290 0.23 -0.0 56,764 - PS417_00290 0.23 +0.4 56,768 + PS417_00290 0.23 -0.5 56,769 - PS417_00290 0.23 -0.2 56,801 - PS417_00290 0.25 +0.3 56,958 + PS417_00290 0.35 +0.0 56,959 - PS417_00290 0.35 -0.1 56,959 - PS417_00290 0.35 +0.4 57,019 + PS417_00290 0.39 -0.8 57,020 - PS417_00290 0.39 -1.2
Or see this region's nucleotide sequence