Experiment: LB_noSalt with Chloride 1100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25155 and PS417_25160 are separated by 708 nucleotides PS417_25160 and PS417_25165 are separated by 400 nucleotides
PS417_25155: PS417_25155 - hypothetical protein, at 5,452,443 to 5,452,703
_25155
PS417_25160: PS417_25160 - hypothetical protein, at 5,453,412 to 5,453,945
_25160
PS417_25165: PS417_25165 - chitin-binding protein, at 5,454,346 to 5,454,981
_25165
Position (kb) 5453
5454 Strain fitness (log2 ratio) -1
0
1 at 5452.518 kb on - strand, within PS417_25155 at 5452.518 kb on - strand, within PS417_25155 at 5452.694 kb on - strand at 5452.795 kb on + strand at 5452.868 kb on + strand at 5452.994 kb on + strand at 5452.995 kb on - strand at 5453.145 kb on + strand at 5453.279 kb on + strand at 5453.295 kb on + strand at 5453.296 kb on - strand at 5453.302 kb on - strand at 5453.330 kb on - strand at 5453.475 kb on + strand, within PS417_25160 at 5453.488 kb on + strand, within PS417_25160 at 5453.552 kb on + strand, within PS417_25160 at 5453.618 kb on + strand, within PS417_25160 at 5453.618 kb on + strand, within PS417_25160 at 5453.646 kb on + strand, within PS417_25160 at 5453.672 kb on - strand at 5453.722 kb on + strand, within PS417_25160 at 5453.722 kb on + strand, within PS417_25160 at 5453.723 kb on - strand, within PS417_25160 at 5453.723 kb on - strand, within PS417_25160 at 5453.723 kb on - strand, within PS417_25160 at 5453.723 kb on - strand, within PS417_25160 at 5453.756 kb on + strand, within PS417_25160 at 5453.757 kb on - strand, within PS417_25160 at 5453.757 kb on - strand, within PS417_25160 at 5453.757 kb on - strand, within PS417_25160 at 5453.757 kb on - strand, within PS417_25160 at 5453.758 kb on + strand, within PS417_25160 at 5453.758 kb on + strand, within PS417_25160 at 5453.758 kb on + strand, within PS417_25160 at 5453.759 kb on - strand, within PS417_25160 at 5453.759 kb on - strand, within PS417_25160 at 5453.784 kb on + strand, within PS417_25160 at 5453.802 kb on - strand, within PS417_25160 at 5453.837 kb on + strand, within PS417_25160 at 5453.861 kb on + strand, within PS417_25160 at 5453.862 kb on - strand, within PS417_25160 at 5453.948 kb on + strand at 5453.966 kb on + strand at 5453.970 kb on - strand at 5454.138 kb on + strand at 5454.150 kb on - strand at 5454.150 kb on - strand at 5454.221 kb on - strand at 5454.331 kb on + strand at 5454.525 kb on - strand at 5454.615 kb on + strand, within PS417_25165 at 5454.771 kb on - strand, within PS417_25165 at 5454.771 kb on - strand, within PS417_25165 at 5454.771 kb on - strand, within PS417_25165 at 5454.771 kb on - strand, within PS417_25165 at 5454.801 kb on + strand, within PS417_25165
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 1100 mM remove 5,452,518 - PS417_25155 0.29 +0.8 5,452,518 - PS417_25155 0.29 +0.6 5,452,694 - +0.7 5,452,795 + +0.3 5,452,868 + +0.7 5,452,994 + +0.4 5,452,995 - +0.1 5,453,145 + -0.1 5,453,279 + +0.3 5,453,295 + +0.5 5,453,296 - -0.7 5,453,302 - -0.2 5,453,330 - +0.1 5,453,475 + PS417_25160 0.12 +0.7 5,453,488 + PS417_25160 0.14 +0.6 5,453,552 + PS417_25160 0.26 +0.7 5,453,618 + PS417_25160 0.39 +1.0 5,453,618 + PS417_25160 0.39 -0.3 5,453,646 + PS417_25160 0.44 +0.6 5,453,672 - -0.1 5,453,722 + PS417_25160 0.58 +0.9 5,453,722 + PS417_25160 0.58 +0.8 5,453,723 - PS417_25160 0.58 +0.7 5,453,723 - PS417_25160 0.58 +0.8 5,453,723 - PS417_25160 0.58 +0.8 5,453,723 - PS417_25160 0.58 +0.3 5,453,756 + PS417_25160 0.64 +0.6 5,453,757 - PS417_25160 0.65 +0.3 5,453,757 - PS417_25160 0.65 +0.4 5,453,757 - PS417_25160 0.65 +0.4 5,453,757 - PS417_25160 0.65 +0.4 5,453,758 + PS417_25160 0.65 +1.5 5,453,758 + PS417_25160 0.65 +0.2 5,453,758 + PS417_25160 0.65 +0.1 5,453,759 - PS417_25160 0.65 -0.1 5,453,759 - PS417_25160 0.65 -0.4 5,453,784 + PS417_25160 0.70 +0.5 5,453,802 - PS417_25160 0.73 +0.6 5,453,837 + PS417_25160 0.80 +1.2 5,453,861 + PS417_25160 0.84 +0.3 5,453,862 - PS417_25160 0.84 +0.7 5,453,948 + +1.0 5,453,966 + +1.1 5,453,970 - -0.3 5,454,138 + +0.3 5,454,150 - +0.7 5,454,150 - +1.0 5,454,221 - +0.2 5,454,331 + +1.4 5,454,525 - +0.1 5,454,615 + PS417_25165 0.42 +0.1 5,454,771 - PS417_25165 0.67 +0.1 5,454,771 - PS417_25165 0.67 +0.5 5,454,771 - PS417_25165 0.67 -0.1 5,454,771 - PS417_25165 0.67 -0.1 5,454,801 + PS417_25165 0.72 -0.0
Or see this region's nucleotide sequence