Strain Fitness in Pseudomonas simiae WCS417 around PS417_06300

Experiment: LB_noSalt with Chloride 1100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPS417_06295 and PS417_06300 are separated by 273 nucleotidesPS417_06300 and PS417_06305 are separated by 5 nucleotides PS417_06295: PS417_06295 - tRNA(Ile)-lysidine synthetase, at 1,398,274 to 1,399,593 _06295 PS417_06300: PS417_06300 - CTP synthetase, at 1,399,867 to 1,401,498 _06300 PS417_06305: PS417_06305 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,401,504 to 1,402,349 _06305 Position (kb) 1399 1400 1401 1402Strain fitness (log2 ratio) -1 0 1at 1402.347 kb on + strandat 1402.382 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 1100 mM
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1,402,347 + -1.6
1,402,382 + +0.2

Or see this region's nucleotide sequence