Experiment: LB_noSalt with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01405 and PS417_01410 overlap by 23 nucleotides PS417_01410 and PS417_01415 overlap by 11 nucleotides PS417_01415 and PS417_01420 are separated by 0 nucleotides
PS417_01405: PS417_01405 - sugar transporter, at 310,332 to 311,699
_01405
PS417_01410: PS417_01410 - transporter, at 311,677 to 312,672
_01410
PS417_01415: PS417_01415 - glycosyl transferase family 1, at 312,662 to 314,176
_01415
PS417_01420: PS417_01420 - histidine kinase, at 314,177 to 315,547
_01420
Position (kb) 312
313
314
315 Strain fitness (log2 ratio) -1
0
1
2
3 at 311.950 kb on + strand, within PS417_01410 at 311.951 kb on - strand, within PS417_01410 at 311.951 kb on - strand, within PS417_01410 at 311.951 kb on - strand, within PS417_01410 at 312.323 kb on - strand, within PS417_01410 at 312.577 kb on + strand at 312.671 kb on - strand at 312.725 kb on + strand at 312.726 kb on - strand at 312.741 kb on + strand at 312.741 kb on + strand at 312.824 kb on + strand, within PS417_01415 at 312.825 kb on - strand, within PS417_01415 at 312.827 kb on - strand, within PS417_01415 at 312.827 kb on - strand, within PS417_01415 at 312.827 kb on - strand, within PS417_01415 at 313.033 kb on + strand, within PS417_01415 at 313.034 kb on - strand, within PS417_01415 at 313.050 kb on + strand, within PS417_01415 at 313.092 kb on - strand, within PS417_01415 at 313.128 kb on - strand, within PS417_01415 at 313.277 kb on + strand, within PS417_01415 at 313.278 kb on - strand, within PS417_01415 at 313.278 kb on - strand, within PS417_01415 at 313.297 kb on + strand, within PS417_01415 at 313.298 kb on - strand, within PS417_01415 at 313.298 kb on - strand, within PS417_01415 at 313.301 kb on + strand, within PS417_01415 at 313.397 kb on + strand, within PS417_01415 at 313.421 kb on + strand, within PS417_01415 at 313.422 kb on - strand, within PS417_01415 at 313.448 kb on + strand, within PS417_01415 at 313.449 kb on - strand, within PS417_01415 at 313.478 kb on + strand, within PS417_01415 at 313.478 kb on + strand, within PS417_01415 at 313.478 kb on + strand, within PS417_01415 at 314.111 kb on + strand at 314.112 kb on - strand at 314.112 kb on - strand at 314.112 kb on - strand at 314.112 kb on - strand at 314.225 kb on + strand at 314.226 kb on - strand at 314.246 kb on + strand at 314.247 kb on - strand at 314.247 kb on - strand at 314.247 kb on - strand at 314.247 kb on - strand at 314.247 kb on - strand at 314.247 kb on - strand at 314.252 kb on + strand at 314.252 kb on + strand at 314.252 kb on + strand at 314.253 kb on - strand at 314.378 kb on + strand, within PS417_01420 at 314.379 kb on - strand, within PS417_01420 at 314.465 kb on + strand, within PS417_01420 at 314.466 kb on - strand, within PS417_01420 at 314.687 kb on + strand, within PS417_01420 at 314.711 kb on + strand, within PS417_01420 at 314.786 kb on + strand, within PS417_01420 at 314.786 kb on + strand, within PS417_01420 at 314.787 kb on - strand, within PS417_01420 at 314.787 kb on - strand, within PS417_01420 at 314.787 kb on - strand, within PS417_01420 at 314.859 kb on + strand, within PS417_01420 at 314.859 kb on + strand, within PS417_01420 at 314.859 kb on + strand, within PS417_01420 at 314.860 kb on - strand, within PS417_01420 at 314.892 kb on - strand, within PS417_01420
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 500 mM remove 311,950 + PS417_01410 0.27 +2.7 311,951 - PS417_01410 0.28 +2.8 311,951 - PS417_01410 0.28 +3.0 311,951 - PS417_01410 0.28 +2.9 312,323 - PS417_01410 0.65 +2.9 312,577 + +2.6 312,671 - +2.6 312,725 + +3.2 312,726 - +0.9 312,741 + +2.6 312,741 + +3.0 312,824 + PS417_01415 0.11 +2.6 312,825 - PS417_01415 0.11 +3.0 312,827 - PS417_01415 0.11 +3.5 312,827 - PS417_01415 0.11 +3.4 312,827 - PS417_01415 0.11 +2.9 313,033 + PS417_01415 0.24 +3.1 313,034 - PS417_01415 0.25 +2.7 313,050 + PS417_01415 0.26 +3.3 313,092 - PS417_01415 0.28 +2.9 313,128 - PS417_01415 0.31 +3.0 313,277 + PS417_01415 0.41 +2.9 313,278 - PS417_01415 0.41 +3.2 313,278 - PS417_01415 0.41 +2.7 313,297 + PS417_01415 0.42 +2.7 313,298 - PS417_01415 0.42 +2.3 313,298 - PS417_01415 0.42 +2.7 313,301 + PS417_01415 0.42 +2.9 313,397 + PS417_01415 0.49 +2.8 313,421 + PS417_01415 0.50 +3.0 313,422 - PS417_01415 0.50 +2.6 313,448 + PS417_01415 0.52 +3.3 313,449 - PS417_01415 0.52 +2.2 313,478 + PS417_01415 0.54 +3.5 313,478 + PS417_01415 0.54 +3.4 313,478 + PS417_01415 0.54 +2.7 314,111 + +2.6 314,112 - +2.6 314,112 - +2.8 314,112 - +2.8 314,112 - +2.4 314,225 + +2.9 314,226 - +2.6 314,246 + +2.5 314,247 - +3.0 314,247 - +3.0 314,247 - +2.7 314,247 - +2.5 314,247 - +2.9 314,247 - +3.0 314,252 + +2.7 314,252 + +2.9 314,252 + +2.9 314,253 - +2.8 314,378 + PS417_01420 0.15 +2.6 314,379 - PS417_01420 0.15 +2.6 314,465 + PS417_01420 0.21 +2.9 314,466 - PS417_01420 0.21 +2.8 314,687 + PS417_01420 0.37 +2.6 314,711 + PS417_01420 0.39 +3.2 314,786 + PS417_01420 0.44 +3.2 314,786 + PS417_01420 0.44 +2.7 314,787 - PS417_01420 0.44 +2.3 314,787 - PS417_01420 0.44 +2.5 314,787 - PS417_01420 0.44 +2.7 314,859 + PS417_01420 0.50 +2.6 314,859 + PS417_01420 0.50 +3.2 314,859 + PS417_01420 0.50 +3.1 314,860 - PS417_01420 0.50 +2.6 314,892 - PS417_01420 0.52 +2.7
Or see this region's nucleotide sequence