Experiment: 6-methoxy-2(3H)-benzoxazolone 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01475 and PS417_01480 are separated by 240 nucleotides PS417_01480 and PS417_01485 overlap by 20 nucleotides PS417_01485 and PS417_01490 are separated by 38 nucleotides
PS417_01475: PS417_01475 - cell division protein FtsQ, at 327,786 to 328,706
_01475
PS417_01480: PS417_01480 - SAM-dependent methyltransferase, at 328,947 to 330,134
_01480
PS417_01485: PS417_01485 - ABC transporter permease, at 330,115 to 330,804
_01485
PS417_01490: PS417_01490 - ABC transporter permease, at 330,843 to 331,538
_01490
Position (kb) 328
329
330
331 Strain fitness (log2 ratio) -1
0
1
2 at 328.307 kb on + strand, within PS417_01475 at 328.375 kb on + strand, within PS417_01475 at 328.375 kb on + strand, within PS417_01475 at 328.566 kb on + strand, within PS417_01475 at 328.567 kb on - strand, within PS417_01475 at 328.567 kb on - strand, within PS417_01475 at 328.698 kb on + strand at 328.705 kb on - strand at 328.717 kb on - strand at 328.718 kb on + strand at 328.738 kb on + strand at 328.738 kb on + strand at 328.738 kb on + strand at 328.739 kb on - strand at 328.739 kb on - strand at 328.870 kb on + strand at 328.871 kb on - strand at 328.871 kb on - strand at 329.010 kb on + strand at 329.011 kb on - strand at 329.140 kb on + strand, within PS417_01480 at 329.209 kb on + strand at 329.264 kb on - strand, within PS417_01480 at 329.467 kb on + strand, within PS417_01480 at 329.468 kb on - strand, within PS417_01480 at 329.468 kb on - strand, within PS417_01480 at 329.468 kb on - strand, within PS417_01480 at 329.677 kb on + strand, within PS417_01480 at 329.709 kb on + strand, within PS417_01480 at 329.710 kb on - strand, within PS417_01480 at 329.879 kb on + strand, within PS417_01480 at 329.879 kb on + strand, within PS417_01480 at 330.033 kb on + strand at 330.033 kb on + strand at 330.172 kb on + strand at 330.182 kb on + strand at 330.182 kb on + strand at 330.198 kb on - strand, within PS417_01485 at 330.198 kb on - strand, within PS417_01485 at 330.236 kb on + strand, within PS417_01485 at 330.241 kb on - strand, within PS417_01485 at 330.380 kb on + strand, within PS417_01485 at 330.380 kb on + strand, within PS417_01485 at 330.380 kb on + strand, within PS417_01485 at 330.381 kb on - strand, within PS417_01485 at 330.381 kb on - strand, within PS417_01485 at 330.480 kb on - strand, within PS417_01485 at 330.584 kb on + strand, within PS417_01485 at 330.588 kb on - strand, within PS417_01485 at 330.639 kb on - strand, within PS417_01485 at 330.644 kb on + strand, within PS417_01485 at 330.645 kb on - strand, within PS417_01485 at 330.662 kb on + strand, within PS417_01485 at 330.663 kb on - strand, within PS417_01485 at 330.663 kb on - strand, within PS417_01485 at 330.833 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-methoxy-2(3H)-benzoxazolone 2.5 mM remove 328,307 + PS417_01475 0.57 +0.1 328,375 + PS417_01475 0.64 -0.1 328,375 + PS417_01475 0.64 -0.3 328,566 + PS417_01475 0.85 -0.6 328,567 - PS417_01475 0.85 +0.3 328,567 - PS417_01475 0.85 +0.3 328,698 + +0.6 328,705 - +0.1 328,717 - -0.3 328,718 + -1.0 328,738 + -1.1 328,738 + -0.3 328,738 + +0.3 328,739 - +0.0 328,739 - +0.1 328,870 + -0.5 328,871 - +0.7 328,871 - +0.1 329,010 + -0.3 329,011 - -1.2 329,140 + PS417_01480 0.16 -1.6 329,209 + +0.8 329,264 - PS417_01480 0.27 -0.6 329,467 + PS417_01480 0.44 -0.5 329,468 - PS417_01480 0.44 -1.5 329,468 - PS417_01480 0.44 -0.6 329,468 - PS417_01480 0.44 -0.6 329,677 + PS417_01480 0.61 +0.6 329,709 + PS417_01480 0.64 +0.0 329,710 - PS417_01480 0.64 +2.0 329,879 + PS417_01480 0.78 +0.2 329,879 + PS417_01480 0.78 -0.1 330,033 + -0.5 330,033 + -0.1 330,172 + +0.6 330,182 + -0.1 330,182 + +0.5 330,198 - PS417_01485 0.12 -0.4 330,198 - PS417_01485 0.12 +0.8 330,236 + PS417_01485 0.18 +0.7 330,241 - PS417_01485 0.18 +0.3 330,380 + PS417_01485 0.38 +1.6 330,380 + PS417_01485 0.38 -0.5 330,380 + PS417_01485 0.38 -0.2 330,381 - PS417_01485 0.39 +0.3 330,381 - PS417_01485 0.39 -0.0 330,480 - PS417_01485 0.53 -0.3 330,584 + PS417_01485 0.68 -0.2 330,588 - PS417_01485 0.69 -0.1 330,639 - PS417_01485 0.76 +0.8 330,644 + PS417_01485 0.77 -0.0 330,645 - PS417_01485 0.77 -0.2 330,662 + PS417_01485 0.79 -1.6 330,663 - PS417_01485 0.79 -0.4 330,663 - PS417_01485 0.79 +0.1 330,833 + -0.2
Or see this region's nucleotide sequence