Experiment: 6-methoxy-2(3H)-benzoxazolone 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13960 and PS417_13965 overlap by 4 nucleotides PS417_13965 and PS417_13970 overlap by 4 nucleotides
PS417_13960: PS417_13960 - MFS transporter, at 3,066,627 to 3,067,778
_13960
PS417_13965: PS417_13965 - acetoin utilization protein, at 3,067,775 to 3,068,887
_13965
PS417_13970: PS417_13970 - glycerate kinase, at 3,068,884 to 3,070,026
_13970
Position (kb)
3067
3068
3069 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3066.918 kb on + strand at 3066.918 kb on + strand, within PS417_13960 at 3066.918 kb on + strand, within PS417_13960 at 3066.918 kb on + strand, within PS417_13960 at 3066.918 kb on + strand, within PS417_13960 at 3066.919 kb on - strand at 3066.919 kb on - strand, within PS417_13960 at 3066.919 kb on - strand, within PS417_13960 at 3066.919 kb on - strand, within PS417_13960 at 3066.919 kb on - strand, within PS417_13960 at 3067.263 kb on + strand, within PS417_13960 at 3067.264 kb on - strand, within PS417_13960 at 3067.264 kb on - strand, within PS417_13960 at 3067.775 kb on - strand at 3067.775 kb on - strand at 3068.021 kb on + strand, within PS417_13965 at 3068.021 kb on + strand, within PS417_13965 at 3068.022 kb on - strand, within PS417_13965 at 3068.723 kb on + strand, within PS417_13965 at 3068.723 kb on + strand, within PS417_13965 at 3068.728 kb on - strand, within PS417_13965 at 3068.920 kb on + strand at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.026 kb on + strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.027 kb on - strand, within PS417_13970 at 3069.200 kb on - strand, within PS417_13970 at 3069.693 kb on - strand, within PS417_13970 at 3069.731 kb on - strand, within PS417_13970
Per-strain Table
Position Strand Gene LocusTag Fraction 6-methoxy-2(3H)-benzoxazolone 2.5 mM remove 3,066,918 + -0.7 3,066,918 + PS417_13960 0.25 +0.7 3,066,918 + PS417_13960 0.25 +0.3 3,066,918 + PS417_13960 0.25 -0.4 3,066,918 + PS417_13960 0.25 -0.1 3,066,919 - -0.1 3,066,919 - PS417_13960 0.25 -0.2 3,066,919 - PS417_13960 0.25 +0.1 3,066,919 - PS417_13960 0.25 -0.1 3,066,919 - PS417_13960 0.25 +0.0 3,067,263 + PS417_13960 0.55 +0.5 3,067,264 - PS417_13960 0.55 -0.6 3,067,264 - PS417_13960 0.55 -0.0 3,067,775 - +0.2 3,067,775 - -0.4 3,068,021 + PS417_13965 0.22 -1.1 3,068,021 + PS417_13965 0.22 -0.8 3,068,022 - PS417_13965 0.22 +1.0 3,068,723 + PS417_13965 0.85 -0.5 3,068,723 + PS417_13965 0.85 -1.8 3,068,728 - PS417_13965 0.86 -1.1 3,068,920 + -3.1 3,069,026 + PS417_13970 0.12 -0.8 3,069,026 + PS417_13970 0.12 +0.2 3,069,026 + PS417_13970 0.12 -1.0 3,069,026 + PS417_13970 0.12 -0.8 3,069,026 + PS417_13970 0.12 -0.3 3,069,026 + PS417_13970 0.12 -0.3 3,069,027 - PS417_13970 0.13 +0.3 3,069,027 - PS417_13970 0.13 -1.6 3,069,027 - PS417_13970 0.13 +0.6 3,069,027 - PS417_13970 0.13 -0.0 3,069,200 - PS417_13970 0.28 -0.7 3,069,693 - PS417_13970 0.71 +0.6 3,069,731 - PS417_13970 0.74 -1.1
Or see this region's nucleotide sequence