Experiment: 6-methoxy-2(3H)-benzoxazolone 1.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02610 and PS417_02615 overlap by 1 nucleotides PS417_02615 and PS417_02620 are separated by 46 nucleotides PS417_02620 and PS417_02625 are separated by 332 nucleotides
PS417_02610: PS417_02610 - hypothetical protein, at 596,757 to 599,243
_02610
PS417_02615: PS417_02615 - transglutaminase, at 599,243 to 600,133
_02615
PS417_02620: PS417_02620 - hypothetical protein, at 600,180 to 600,362
_02620
PS417_02625: PS417_02625 - azurin, at 600,695 to 601,141
_02625
Position (kb) 599
600
601 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 598.278 kb on + strand, within PS417_02610 at 598.279 kb on - strand, within PS417_02610 at 598.283 kb on - strand, within PS417_02610 at 598.283 kb on - strand, within PS417_02610 at 598.283 kb on - strand, within PS417_02610 at 598.378 kb on - strand, within PS417_02610 at 598.715 kb on + strand, within PS417_02610 at 598.875 kb on + strand at 599.285 kb on + strand at 599.286 kb on - strand at 599.286 kb on - strand at 599.428 kb on + strand at 599.497 kb on - strand, within PS417_02615 at 599.579 kb on - strand, within PS417_02615 at 599.628 kb on - strand, within PS417_02615 at 599.704 kb on - strand, within PS417_02615 at 599.867 kb on + strand, within PS417_02615 at 599.867 kb on + strand at 599.868 kb on - strand, within PS417_02615 at 599.868 kb on - strand, within PS417_02615 at 599.869 kb on + strand, within PS417_02615 at 599.870 kb on - strand, within PS417_02615 at 600.072 kb on + strand at 600.347 kb on - strand at 600.347 kb on - strand at 600.350 kb on + strand at 600.350 kb on + strand at 600.351 kb on - strand at 600.351 kb on - strand at 600.375 kb on - strand at 600.424 kb on + strand at 600.467 kb on - strand at 600.539 kb on + strand at 600.553 kb on + strand at 600.554 kb on - strand at 600.554 kb on - strand at 600.554 kb on - strand at 600.565 kb on + strand at 600.565 kb on + strand at 600.566 kb on - strand at 600.566 kb on - strand at 600.625 kb on - strand at 601.077 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-methoxy-2(3H)-benzoxazolone 1.2 mM remove 598,278 + PS417_02610 0.61 +0.1 598,279 - PS417_02610 0.61 +0.0 598,283 - PS417_02610 0.61 +0.2 598,283 - PS417_02610 0.61 -1.5 598,283 - PS417_02610 0.61 +0.5 598,378 - PS417_02610 0.65 +0.6 598,715 + PS417_02610 0.79 -0.4 598,875 + -2.0 599,285 + -0.1 599,286 - -0.4 599,286 - +0.5 599,428 + +1.5 599,497 - PS417_02615 0.29 -1.1 599,579 - PS417_02615 0.38 -0.6 599,628 - PS417_02615 0.43 -2.0 599,704 - PS417_02615 0.52 -1.4 599,867 + PS417_02615 0.70 -0.5 599,867 + +3.0 599,868 - PS417_02615 0.70 -0.4 599,868 - PS417_02615 0.70 +0.0 599,869 + PS417_02615 0.70 -1.8 599,870 - PS417_02615 0.70 -1.0 600,072 + +0.5 600,347 - +0.0 600,347 - +1.3 600,350 + +0.1 600,350 + -1.0 600,351 - +1.0 600,351 - -1.1 600,375 - +0.0 600,424 + -0.1 600,467 - -0.6 600,539 + -0.5 600,553 + +0.3 600,554 - -0.2 600,554 - -0.1 600,554 - +0.8 600,565 + +1.1 600,565 + -0.1 600,566 - -0.6 600,566 - +1.2 600,625 - +0.4 601,077 - +0.8
Or see this region's nucleotide sequence