Experiment: LB_noSalt with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26650 and PS417_26655 are separated by 184 nucleotides PS417_26655 and PS417_26660 overlap by 4 nucleotides PS417_26660 and PS417_26665 are separated by 12 nucleotides PS417_26665 and PS417_26670 are separated by 46 nucleotides
PS417_26650: PS417_26650 - histidine kinase, at 5,757,582 to 5,763,386
_26650
PS417_26655: PS417_26655 - chemotaxis protein, at 5,763,571 to 5,765,622
_26655
PS417_26660: PS417_26660 - protein PilI, at 5,765,619 to 5,766,143
_26660
PS417_26665: PS417_26665 - chemotaxis protein CheY, at 5,766,156 to 5,766,521
_26665
PS417_26670: PS417_26670 - pilus assembly protein PilG, at 5,766,568 to 5,766,975
_26670
Position (kb) 5763
5764
5765
5766 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5763.081 kb on + strand at 5763.082 kb on - strand at 5763.082 kb on - strand at 5763.082 kb on - strand at 5763.086 kb on - strand at 5763.296 kb on - strand at 5763.367 kb on + strand at 5763.367 kb on + strand at 5763.367 kb on + strand at 5763.368 kb on - strand at 5763.386 kb on + strand at 5763.387 kb on - strand at 5763.387 kb on - strand at 5763.498 kb on - strand at 5763.501 kb on + strand at 5763.564 kb on + strand at 5763.565 kb on - strand at 5763.565 kb on - strand at 5763.565 kb on - strand at 5764.460 kb on + strand, within PS417_26655 at 5764.461 kb on - strand, within PS417_26655 at 5764.782 kb on + strand, within PS417_26655 at 5764.782 kb on + strand, within PS417_26655 at 5765.089 kb on + strand, within PS417_26655 at 5765.090 kb on - strand, within PS417_26655 at 5765.287 kb on + strand, within PS417_26655 at 5765.474 kb on + strand at 5765.475 kb on - strand at 5765.475 kb on - strand at 5765.486 kb on + strand at 5765.486 kb on + strand at 5765.486 kb on + strand at 5765.487 kb on - strand at 5765.810 kb on + strand, within PS417_26660 at 5765.810 kb on + strand, within PS417_26660 at 5765.811 kb on - strand at 5765.812 kb on + strand, within PS417_26660 at 5765.813 kb on - strand, within PS417_26660 at 5765.813 kb on - strand, within PS417_26660 at 5765.813 kb on - strand, within PS417_26660 at 5766.004 kb on + strand, within PS417_26660 at 5766.005 kb on - strand, within PS417_26660 at 5766.005 kb on - strand, within PS417_26660 at 5766.169 kb on - strand at 5766.535 kb on - strand at 5766.535 kb on - strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.606 kb on - strand at 5766.606 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 500 mM remove 5,763,081 + +0.4 5,763,082 - -0.5 5,763,082 - -0.9 5,763,082 - +1.0 5,763,086 - -0.0 5,763,296 - +0.5 5,763,367 + +1.8 5,763,367 + +2.0 5,763,367 + +1.8 5,763,368 - -0.6 5,763,386 + +1.0 5,763,387 - +0.8 5,763,387 - +1.0 5,763,498 - +0.1 5,763,501 + -0.4 5,763,564 + -0.3 5,763,565 - +0.6 5,763,565 - -0.6 5,763,565 - +0.1 5,764,460 + PS417_26655 0.43 +1.9 5,764,461 - PS417_26655 0.43 +1.3 5,764,782 + PS417_26655 0.59 +2.0 5,764,782 + PS417_26655 0.59 +1.0 5,765,089 + PS417_26655 0.74 +1.4 5,765,090 - PS417_26655 0.74 +2.0 5,765,287 + PS417_26655 0.84 +2.5 5,765,474 + +1.4 5,765,475 - +0.3 5,765,475 - +3.1 5,765,486 + +1.3 5,765,486 + +0.5 5,765,486 + +2.4 5,765,487 - +1.6 5,765,810 + PS417_26660 0.36 +2.8 5,765,810 + PS417_26660 0.36 +2.3 5,765,811 - +4.5 5,765,812 + PS417_26660 0.37 +1.7 5,765,813 - PS417_26660 0.37 +1.1 5,765,813 - PS417_26660 0.37 +1.2 5,765,813 - PS417_26660 0.37 +1.6 5,766,004 + PS417_26660 0.73 +2.1 5,766,005 - PS417_26660 0.74 +1.0 5,766,005 - PS417_26660 0.74 +1.4 5,766,169 - -1.9 5,766,535 - -0.5 5,766,535 - -0.9 5,766,538 + +1.1 5,766,538 + -0.4 5,766,538 + +1.9 5,766,538 + +1.2 5,766,538 + +0.9 5,766,539 - +0.1 5,766,539 - +2.7 5,766,539 - -0.5 5,766,539 - -1.0 5,766,539 - -0.6 5,766,539 - -1.6 5,766,539 - +0.0 5,766,606 - -0.1 5,766,606 - -0.1
Or see this region's nucleotide sequence