Experiment: LB_noSalt with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_08750 and PS417_08755 are separated by 11 nucleotides PS417_08755 and PS417_08760 are separated by 305 nucleotides PS417_08760 and PS417_08765 are separated by 9 nucleotides
PS417_08750: PS417_08750 - hypothetical protein, at 1,904,343 to 1,904,531
_08750
PS417_08755: PS417_08755 - CopG family transcriptional regulator, at 1,904,543 to 1,904,947
_08755
PS417_08760: PS417_08760 - metalloprotease, at 1,905,253 to 1,906,815
_08760
PS417_08765: PS417_08765 - MFS transporter, at 1,906,825 to 1,907,979
_08765
Position (kb)
1905
1906
1907 Strain fitness (log2 ratio)
-1
0
1
2 at 1904.417 kb on + strand, within PS417_08750 at 1904.846 kb on + strand, within PS417_08755 at 1904.957 kb on - strand at 1904.964 kb on - strand at 1904.985 kb on + strand at 1904.985 kb on + strand at 1905.079 kb on - strand at 1905.259 kb on - strand at 1905.263 kb on - strand at 1905.339 kb on + strand at 1905.339 kb on + strand at 1905.350 kb on - strand at 1905.408 kb on + strand at 1905.409 kb on - strand at 1905.409 kb on - strand at 1905.409 kb on - strand at 1905.409 kb on - strand at 1905.409 kb on - strand at 1905.437 kb on - strand, within PS417_08760 at 1905.743 kb on - strand, within PS417_08760 at 1905.817 kb on + strand, within PS417_08760 at 1905.818 kb on - strand, within PS417_08760 at 1905.818 kb on - strand, within PS417_08760 at 1905.949 kb on + strand, within PS417_08760 at 1905.950 kb on - strand, within PS417_08760 at 1906.353 kb on - strand at 1906.508 kb on + strand, within PS417_08760 at 1906.934 kb on + strand at 1906.934 kb on + strand at 1906.934 kb on + strand at 1906.935 kb on - strand at 1906.991 kb on + strand, within PS417_08765 at 1906.991 kb on + strand, within PS417_08765 at 1906.992 kb on - strand, within PS417_08765 at 1907.033 kb on + strand, within PS417_08765 at 1907.033 kb on + strand, within PS417_08765 at 1907.033 kb on + strand, within PS417_08765 at 1907.033 kb on + strand, within PS417_08765 at 1907.034 kb on - strand, within PS417_08765 at 1907.059 kb on - strand, within PS417_08765 at 1907.129 kb on - strand, within PS417_08765 at 1907.190 kb on + strand, within PS417_08765 at 1907.426 kb on + strand, within PS417_08765 at 1907.427 kb on - strand, within PS417_08765
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 500 mM remove 1,904,417 + PS417_08750 0.39 -0.1 1,904,846 + PS417_08755 0.75 +0.1 1,904,957 - -0.3 1,904,964 - -0.4 1,904,985 + -0.0 1,904,985 + -0.3 1,905,079 - -0.5 1,905,259 - +0.1 1,905,263 - +0.3 1,905,339 + -0.3 1,905,339 + -0.2 1,905,350 - +0.5 1,905,408 + +0.5 1,905,409 - +0.3 1,905,409 - -0.2 1,905,409 - -0.1 1,905,409 - +0.4 1,905,409 - +1.0 1,905,437 - PS417_08760 0.12 +1.1 1,905,743 - PS417_08760 0.31 +1.8 1,905,817 + PS417_08760 0.36 +1.7 1,905,818 - PS417_08760 0.36 +0.6 1,905,818 - PS417_08760 0.36 +0.1 1,905,949 + PS417_08760 0.45 +0.1 1,905,950 - PS417_08760 0.45 -0.1 1,906,353 - -1.1 1,906,508 + PS417_08760 0.80 +0.4 1,906,934 + -0.4 1,906,934 + -0.1 1,906,934 + -0.2 1,906,935 - -1.2 1,906,991 + PS417_08765 0.14 +0.1 1,906,991 + PS417_08765 0.14 +0.2 1,906,992 - PS417_08765 0.14 +0.5 1,907,033 + PS417_08765 0.18 -0.5 1,907,033 + PS417_08765 0.18 -0.5 1,907,033 + PS417_08765 0.18 +0.1 1,907,033 + PS417_08765 0.18 +0.2 1,907,034 - PS417_08765 0.18 -0.1 1,907,059 - PS417_08765 0.20 +0.0 1,907,129 - PS417_08765 0.26 +0.0 1,907,190 + PS417_08765 0.32 -1.5 1,907,426 + PS417_08765 0.52 +0.1 1,907,427 - PS417_08765 0.52 -0.1
Or see this region's nucleotide sequence