Experiment: gluconate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0243 and PP_0244 are separated by 153 nucleotides PP_0244 and PP_0245 overlap by 1 nucleotides
PP_0243: PP_0243 - Glutamate--cysteine ligase, at 296,426 to 298,003
_0243
PP_0244: PP_0244 - conserved protein of unknown function, at 298,157 to 298,540
_0244
PP_0245: PP_0245 - putative transcriptional accessory protein, at 298,540 to 301,125
_0245
Position (kb) 298
299 Strain fitness (log2 ratio) -1
0
1
2 at 298.008 kb on + strand at 298.009 kb on - strand at 298.049 kb on + strand at 298.057 kb on + strand at 298.057 kb on + strand at 298.066 kb on - strand at 298.066 kb on - strand at 298.066 kb on - strand at 298.143 kb on + strand at 298.144 kb on - strand at 298.158 kb on + strand at 298.158 kb on + strand at 298.158 kb on + strand at 298.159 kb on - strand at 298.159 kb on - strand at 298.211 kb on + strand, within PP_0244 at 298.211 kb on + strand at 298.211 kb on + strand, within PP_0244 at 298.211 kb on + strand, within PP_0244 at 298.212 kb on - strand, within PP_0244 at 298.299 kb on + strand, within PP_0244 at 298.299 kb on + strand, within PP_0244 at 298.299 kb on + strand, within PP_0244 at 298.299 kb on + strand, within PP_0244 at 298.300 kb on - strand, within PP_0244 at 298.521 kb on + strand at 298.522 kb on - strand at 298.532 kb on + strand at 298.532 kb on + strand at 298.533 kb on - strand at 298.541 kb on + strand at 298.541 kb on + strand at 298.541 kb on + strand at 298.542 kb on - strand at 298.833 kb on + strand, within PP_0245 at 298.834 kb on - strand, within PP_0245 at 298.834 kb on - strand at 298.888 kb on - strand, within PP_0245 at 299.022 kb on - strand, within PP_0245 at 299.462 kb on + strand, within PP_0245 at 299.462 kb on + strand, within PP_0245 at 299.463 kb on - strand, within PP_0245
Per-strain Table
Position Strand Gene LocusTag Fraction gluconate (C) remove 298,008 + +2.5 298,009 - +0.1 298,049 + +0.7 298,057 + +1.4 298,057 + +0.7 298,066 - +1.3 298,066 - -0.8 298,066 - +1.3 298,143 + -0.8 298,144 - -0.2 298,158 + -0.0 298,158 + +0.4 298,158 + -0.1 298,159 - +0.5 298,159 - +0.2 298,211 + PP_0244 0.14 -0.2 298,211 + -0.4 298,211 + PP_0244 0.14 +1.0 298,211 + PP_0244 0.14 +1.4 298,212 - PP_0244 0.14 +0.7 298,299 + PP_0244 0.37 +0.1 298,299 + PP_0244 0.37 -0.4 298,299 + PP_0244 0.37 +0.7 298,299 + PP_0244 0.37 -0.2 298,300 - PP_0244 0.37 +0.5 298,521 + -0.5 298,522 - -0.8 298,532 + +0.5 298,532 + +0.6 298,533 - +0.1 298,541 + +1.0 298,541 + +0.7 298,541 + -0.8 298,542 - +0.1 298,833 + PP_0245 0.11 -0.6 298,834 - PP_0245 0.11 +0.6 298,834 - +2.5 298,888 - PP_0245 0.13 -0.3 299,022 - PP_0245 0.19 -0.9 299,462 + PP_0245 0.36 -0.4 299,462 + PP_0245 0.36 +0.4 299,463 - PP_0245 0.36 -0.0
Or see this region's nucleotide sequence