Experiment: Ethyl decanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4496 and PP_4497 are separated by 265 nucleotides PP_4497 and PP_4498 overlap by 14 nucleotides PP_4498 and PP_4499 overlap by 37 nucleotides
PP_4496: PP_4496 - 23S rRNA pseudouridine 2605 synthase, at 5,111,344 to 5,112,411
_4496
PP_4497: PP_4497 - conserved protein of unknown function, at 5,112,677 to 5,113,444
_4497
PP_4498: PP_4498 - Segregation and condensation protein A, at 5,113,431 to 5,114,318
_4498
PP_4499: PP_4499 - putative maturation enzyme, at 5,114,282 to 5,114,947
_4499
Position (kb) 5112
5113
5114 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5111.822 kb on + strand at 5111.951 kb on - strand, within PP_4496 at 5111.976 kb on - strand, within PP_4496 at 5112.162 kb on - strand at 5112.162 kb on - strand, within PP_4496 at 5112.383 kb on + strand at 5112.384 kb on - strand at 5112.430 kb on - strand at 5112.430 kb on - strand at 5112.513 kb on + strand at 5112.591 kb on + strand at 5112.592 kb on - strand at 5112.623 kb on - strand at 5113.069 kb on + strand, within PP_4497 at 5113.069 kb on + strand, within PP_4497 at 5113.069 kb on + strand, within PP_4497 at 5113.070 kb on - strand, within PP_4497 at 5113.070 kb on - strand, within PP_4497 at 5113.131 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.216 kb on - strand, within PP_4497 at 5113.356 kb on + strand, within PP_4497 at 5113.357 kb on - strand, within PP_4497 at 5113.773 kb on + strand, within PP_4498 at 5113.773 kb on + strand, within PP_4498 at 5113.870 kb on + strand, within PP_4498 at 5113.870 kb on + strand, within PP_4498 at 5113.871 kb on - strand, within PP_4498 at 5113.991 kb on - strand, within PP_4498 at 5114.013 kb on + strand, within PP_4498 at 5114.014 kb on - strand, within PP_4498 at 5114.014 kb on - strand, within PP_4498 at 5114.035 kb on + strand, within PP_4498 at 5114.035 kb on + strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.044 kb on + strand at 5114.044 kb on + strand, within PP_4498 at 5114.044 kb on + strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.107 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.174 kb on - strand, within PP_4498 at 5114.174 kb on - strand, within PP_4498 at 5114.209 kb on + strand, within PP_4498
Per-strain Table
Position Strand Gene LocusTag Fraction Ethyl decanoate (C) remove 5,111,822 + +1.8 5,111,951 - PP_4496 0.57 +1.4 5,111,976 - PP_4496 0.59 +2.4 5,112,162 - +1.1 5,112,162 - PP_4496 0.77 -1.5 5,112,383 + +1.7 5,112,384 - -0.7 5,112,430 - -1.0 5,112,430 - -0.2 5,112,513 + -0.2 5,112,591 + +0.9 5,112,592 - +1.2 5,112,623 - +0.2 5,113,069 + PP_4497 0.51 -2.0 5,113,069 + PP_4497 0.51 -1.2 5,113,069 + PP_4497 0.51 -1.4 5,113,070 - PP_4497 0.51 +0.4 5,113,070 - PP_4497 0.51 -0.4 5,113,131 + PP_4497 0.59 +2.4 5,113,215 + PP_4497 0.70 +0.1 5,113,215 + PP_4497 0.70 -0.7 5,113,215 + PP_4497 0.70 -2.2 5,113,215 + PP_4497 0.70 -0.2 5,113,215 + PP_4497 0.70 -0.7 5,113,216 - PP_4497 0.70 -0.8 5,113,356 + PP_4497 0.88 -0.4 5,113,357 - PP_4497 0.89 -1.6 5,113,773 + PP_4498 0.39 +0.3 5,113,773 + PP_4498 0.39 +1.8 5,113,870 + PP_4498 0.49 -0.6 5,113,870 + PP_4498 0.49 -0.3 5,113,871 - PP_4498 0.50 -0.2 5,113,991 - PP_4498 0.63 -0.1 5,114,013 + PP_4498 0.66 +0.0 5,114,014 - PP_4498 0.66 -1.7 5,114,014 - PP_4498 0.66 +0.2 5,114,035 + PP_4498 0.68 -0.1 5,114,035 + PP_4498 0.68 -0.8 5,114,036 - PP_4498 0.68 -1.0 5,114,036 - PP_4498 0.68 -2.5 5,114,036 - PP_4498 0.68 -0.4 5,114,044 + +2.4 5,114,044 + PP_4498 0.69 -0.8 5,114,044 + PP_4498 0.69 +1.0 5,114,045 - PP_4498 0.69 +0.8 5,114,045 - PP_4498 0.69 -0.5 5,114,045 - PP_4498 0.69 -0.4 5,114,045 - PP_4498 0.69 -0.8 5,114,087 + PP_4498 0.74 +0.3 5,114,087 + PP_4498 0.74 +0.8 5,114,087 + PP_4498 0.74 +0.3 5,114,087 + PP_4498 0.74 -0.1 5,114,107 + PP_4498 0.76 -0.6 5,114,173 + PP_4498 0.84 -0.1 5,114,173 + PP_4498 0.84 -0.7 5,114,173 + PP_4498 0.84 +2.0 5,114,174 - PP_4498 0.84 -2.6 5,114,174 - PP_4498 0.84 -1.7 5,114,209 + PP_4498 0.88 -0.6
Or see this region's nucleotide sequence