Experiment: Ethyl decanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_1221 and PP_1222 overlap by 4 nucleotides PP_1222 and PP_1223 are separated by 54 nucleotides PP_1223 and PP_1224 are separated by 6 nucleotides
PP_1221: PP_1221 - colicin S4 and filamentous phage transport system, at 1,397,053 to 1,398,171
_1221
PP_1222: PP_1222 - component of the Tol biopolymer transport system, at 1,398,168 to 1,399,469
_1222
PP_1223: PP_1223 - peptidoglycan-associated lipoprotein, at 1,399,524 to 1,400,024
_1223
PP_1224: PP_1224 - periplasmic subunit of the TolQRA transport system, at 1,400,031 to 1,400,837
_1224
Position (kb)
1398
1399
1400 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1399.492 kb on + strand at 1399.511 kb on + strand at 1399.511 kb on + strand at 1399.511 kb on + strand at 1400.018 kb on + strand at 1400.018 kb on + strand at 1400.018 kb on + strand at 1400.022 kb on + strand at 1400.022 kb on + strand at 1400.022 kb on + strand at 1400.030 kb on + strand at 1400.036 kb on + strand at 1400.036 kb on + strand at 1400.036 kb on + strand at 1400.036 kb on + strand at 1400.036 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethyl decanoate (C) remove 1,399,492 + -1.2 1,399,511 + -0.6 1,399,511 + +0.2 1,399,511 + -0.5 1,400,018 + -3.1 1,400,018 + -2.9 1,400,018 + +0.2 1,400,022 + -0.6 1,400,022 + +0.8 1,400,022 + -1.4 1,400,030 + +0.2 1,400,036 + -1.1 1,400,036 + -1.3 1,400,036 + -0.6 1,400,036 + -0.9 1,400,036 + -1.4
Or see this region's nucleotide sequence