Experiment: 4-Guanidinobutyric (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4521 and PP_4522 are separated by 138 nucleotides PP_4522 and PP_4523 are separated by 212 nucleotides
PP_4521: PP_4521 - putative aerotaxis receptor, at 5,135,004 to 5,136,569
_4521
PP_4522: PP_4522 - Transcriptional regulator, LysR family, at 5,136,708 to 5,137,601
_4522
PP_4523: PP_4523 - putative Agmatinase, at 5,137,814 to 5,138,776
_4523
Position (kb)
5136
5137
5138 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5135.917 kb on + strand, within PP_4521 at 5135.918 kb on - strand, within PP_4521 at 5135.918 kb on - strand, within PP_4521 at 5135.942 kb on + strand, within PP_4521 at 5135.942 kb on + strand, within PP_4521 at 5135.942 kb on + strand, within PP_4521 at 5136.007 kb on + strand, within PP_4521 at 5136.008 kb on - strand, within PP_4521 at 5136.008 kb on - strand, within PP_4521 at 5136.052 kb on + strand, within PP_4521 at 5136.070 kb on + strand, within PP_4521 at 5136.181 kb on + strand, within PP_4521 at 5136.181 kb on + strand, within PP_4521 at 5136.181 kb on + strand, within PP_4521 at 5136.182 kb on - strand, within PP_4521 at 5136.182 kb on - strand, within PP_4521 at 5136.239 kb on - strand, within PP_4521 at 5136.239 kb on - strand, within PP_4521 at 5136.262 kb on + strand, within PP_4521 at 5136.262 kb on + strand, within PP_4521 at 5136.262 kb on + strand, within PP_4521 at 5136.265 kb on - strand, within PP_4521 at 5136.277 kb on + strand, within PP_4521 at 5136.278 kb on - strand, within PP_4521 at 5136.292 kb on + strand, within PP_4521 at 5136.292 kb on + strand, within PP_4521 at 5136.293 kb on - strand, within PP_4521 at 5136.295 kb on + strand, within PP_4521 at 5136.295 kb on + strand, within PP_4521 at 5136.296 kb on - strand, within PP_4521 at 5136.365 kb on + strand, within PP_4521 at 5136.366 kb on - strand, within PP_4521 at 5136.366 kb on - strand, within PP_4521 at 5136.436 kb on + strand at 5136.437 kb on - strand at 5136.441 kb on - strand at 5136.475 kb on + strand at 5136.476 kb on - strand at 5136.476 kb on - strand at 5136.476 kb on - strand at 5136.476 kb on - strand at 5136.509 kb on + strand at 5136.595 kb on + strand at 5136.623 kb on + strand at 5136.623 kb on + strand at 5136.623 kb on + strand at 5136.624 kb on - strand at 5136.624 kb on - strand at 5136.627 kb on + strand at 5136.868 kb on + strand, within PP_4522 at 5136.868 kb on + strand, within PP_4522 at 5136.869 kb on - strand, within PP_4522 at 5136.884 kb on - strand, within PP_4522 at 5136.884 kb on - strand, within PP_4522 at 5136.890 kb on + strand, within PP_4522 at 5136.892 kb on + strand, within PP_4522 at 5136.892 kb on + strand, within PP_4522 at 5136.892 kb on + strand, within PP_4522 at 5136.893 kb on - strand, within PP_4522 at 5136.893 kb on - strand, within PP_4522 at 5136.893 kb on - strand, within PP_4522 at 5136.893 kb on - strand, within PP_4522 at 5136.893 kb on - strand, within PP_4522 at 5137.023 kb on + strand, within PP_4522 at 5137.024 kb on - strand, within PP_4522 at 5137.051 kb on + strand, within PP_4522 at 5137.052 kb on - strand, within PP_4522 at 5137.052 kb on - strand, within PP_4522 at 5137.052 kb on - strand, within PP_4522 at 5137.052 kb on - strand, within PP_4522 at 5137.076 kb on - strand, within PP_4522 at 5137.076 kb on - strand, within PP_4522 at 5137.076 kb on - strand, within PP_4522 at 5137.096 kb on + strand, within PP_4522 at 5137.097 kb on - strand, within PP_4522 at 5137.108 kb on + strand, within PP_4522 at 5137.189 kb on + strand, within PP_4522 at 5137.190 kb on - strand, within PP_4522 at 5137.206 kb on + strand, within PP_4522 at 5137.206 kb on + strand, within PP_4522 at 5137.207 kb on - strand, within PP_4522 at 5137.207 kb on - strand, within PP_4522 at 5137.345 kb on + strand, within PP_4522 at 5137.345 kb on + strand, within PP_4522 at 5137.346 kb on - strand, within PP_4522 at 5137.346 kb on - strand, within PP_4522 at 5137.346 kb on - strand, within PP_4522 at 5137.454 kb on + strand, within PP_4522 at 5137.483 kb on + strand, within PP_4522 at 5137.483 kb on + strand, within PP_4522 at 5137.483 kb on + strand, within PP_4522 at 5137.484 kb on - strand, within PP_4522 at 5137.487 kb on + strand, within PP_4522 at 5137.487 kb on + strand, within PP_4522 at 5137.487 kb on + strand, within PP_4522 at 5137.488 kb on - strand, within PP_4522 at 5137.488 kb on - strand, within PP_4522 at 5137.488 kb on - strand, within PP_4522 at 5137.488 kb on - strand, within PP_4522 at 5137.562 kb on - strand at 5137.623 kb on + strand at 5137.623 kb on + strand at 5137.624 kb on - strand at 5137.624 kb on - strand at 5137.624 kb on - strand at 5137.624 kb on - strand at 5137.624 kb on - strand at 5137.624 kb on - strand at 5137.638 kb on + strand at 5137.639 kb on - strand at 5137.639 kb on - strand at 5137.647 kb on + strand at 5137.677 kb on + strand at 5137.678 kb on - strand at 5137.678 kb on - strand at 5137.681 kb on + strand at 5137.682 kb on - strand at 5137.682 kb on - strand at 5137.960 kb on + strand, within PP_4523 at 5137.975 kb on - strand, within PP_4523 at 5137.975 kb on - strand, within PP_4523 at 5137.975 kb on - strand, within PP_4523 at 5138.036 kb on + strand, within PP_4523 at 5138.037 kb on - strand, within PP_4523 at 5138.150 kb on + strand, within PP_4523 at 5138.151 kb on - strand, within PP_4523 at 5138.263 kb on - strand, within PP_4523 at 5138.402 kb on + strand, within PP_4523 at 5138.402 kb on + strand, within PP_4523 at 5138.402 kb on + strand, within PP_4523 at 5138.532 kb on - strand, within PP_4523 at 5138.532 kb on - strand, within PP_4523 at 5138.532 kb on - strand at 5138.532 kb on - strand, within PP_4523 at 5138.532 kb on - strand, within PP_4523
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Guanidinobutyric (N) remove 5,135,917 + PP_4521 0.58 -0.3 5,135,918 - PP_4521 0.58 +1.2 5,135,918 - PP_4521 0.58 -0.3 5,135,942 + PP_4521 0.60 +0.2 5,135,942 + PP_4521 0.60 +0.9 5,135,942 + PP_4521 0.60 +0.0 5,136,007 + PP_4521 0.64 -0.1 5,136,008 - PP_4521 0.64 -0.3 5,136,008 - PP_4521 0.64 -1.0 5,136,052 + PP_4521 0.67 +1.2 5,136,070 + PP_4521 0.68 -0.5 5,136,181 + PP_4521 0.75 -0.3 5,136,181 + PP_4521 0.75 -1.6 5,136,181 + PP_4521 0.75 -1.0 5,136,182 - PP_4521 0.75 -0.1 5,136,182 - PP_4521 0.75 +0.3 5,136,239 - PP_4521 0.79 +0.2 5,136,239 - PP_4521 0.79 -0.3 5,136,262 + PP_4521 0.80 -0.4 5,136,262 + PP_4521 0.80 +0.6 5,136,262 + PP_4521 0.80 +0.0 5,136,265 - PP_4521 0.81 +1.9 5,136,277 + PP_4521 0.81 -0.2 5,136,278 - PP_4521 0.81 +0.2 5,136,292 + PP_4521 0.82 -0.0 5,136,292 + PP_4521 0.82 -0.2 5,136,293 - PP_4521 0.82 -0.3 5,136,295 + PP_4521 0.82 -0.8 5,136,295 + PP_4521 0.82 -0.9 5,136,296 - PP_4521 0.83 +0.3 5,136,365 + PP_4521 0.87 -0.1 5,136,366 - PP_4521 0.87 -0.9 5,136,366 - PP_4521 0.87 +0.6 5,136,436 + +0.1 5,136,437 - -0.3 5,136,441 - +0.7 5,136,475 + -0.2 5,136,476 - +0.4 5,136,476 - -0.1 5,136,476 - +0.2 5,136,476 - +0.3 5,136,509 + +0.5 5,136,595 + +0.0 5,136,623 + -0.1 5,136,623 + -0.0 5,136,623 + -1.0 5,136,624 - +0.5 5,136,624 - +0.3 5,136,627 + -0.5 5,136,868 + PP_4522 0.18 -0.3 5,136,868 + PP_4522 0.18 -0.7 5,136,869 - PP_4522 0.18 -1.3 5,136,884 - PP_4522 0.20 -0.8 5,136,884 - PP_4522 0.20 -0.6 5,136,890 + PP_4522 0.20 -1.4 5,136,892 + PP_4522 0.21 -0.8 5,136,892 + PP_4522 0.21 -1.1 5,136,892 + PP_4522 0.21 -1.2 5,136,893 - PP_4522 0.21 -1.1 5,136,893 - PP_4522 0.21 -1.1 5,136,893 - PP_4522 0.21 -0.2 5,136,893 - PP_4522 0.21 +1.3 5,136,893 - PP_4522 0.21 -0.7 5,137,023 + PP_4522 0.35 -1.3 5,137,024 - PP_4522 0.35 -0.4 5,137,051 + PP_4522 0.38 -1.1 5,137,052 - PP_4522 0.38 -1.4 5,137,052 - PP_4522 0.38 -0.3 5,137,052 - PP_4522 0.38 -1.3 5,137,052 - PP_4522 0.38 -0.6 5,137,076 - PP_4522 0.41 -1.4 5,137,076 - PP_4522 0.41 -0.5 5,137,076 - PP_4522 0.41 -0.6 5,137,096 + PP_4522 0.43 -0.4 5,137,097 - PP_4522 0.44 +0.1 5,137,108 + PP_4522 0.45 -1.5 5,137,189 + PP_4522 0.54 -1.2 5,137,190 - PP_4522 0.54 -0.3 5,137,206 + PP_4522 0.56 -0.8 5,137,206 + PP_4522 0.56 -0.8 5,137,207 - PP_4522 0.56 -0.2 5,137,207 - PP_4522 0.56 -0.2 5,137,345 + PP_4522 0.71 -0.9 5,137,345 + PP_4522 0.71 -1.9 5,137,346 - PP_4522 0.71 -0.8 5,137,346 - PP_4522 0.71 -0.8 5,137,346 - PP_4522 0.71 -0.4 5,137,454 + PP_4522 0.83 -1.6 5,137,483 + PP_4522 0.87 -1.1 5,137,483 + PP_4522 0.87 -0.4 5,137,483 + PP_4522 0.87 -1.4 5,137,484 - PP_4522 0.87 -1.3 5,137,487 + PP_4522 0.87 -0.5 5,137,487 + PP_4522 0.87 -0.8 5,137,487 + PP_4522 0.87 -0.7 5,137,488 - PP_4522 0.87 -0.1 5,137,488 - PP_4522 0.87 -2.6 5,137,488 - PP_4522 0.87 -1.1 5,137,488 - PP_4522 0.87 -1.6 5,137,562 - +0.0 5,137,623 + -1.8 5,137,623 + -0.2 5,137,624 - -0.6 5,137,624 - -0.5 5,137,624 - +0.0 5,137,624 - +0.0 5,137,624 - -1.7 5,137,624 - -0.2 5,137,638 + -1.9 5,137,639 - -0.1 5,137,639 - +0.5 5,137,647 + -1.1 5,137,677 + -0.0 5,137,678 - +0.7 5,137,678 - -1.3 5,137,681 + +0.0 5,137,682 - -2.8 5,137,682 - -2.6 5,137,960 + PP_4523 0.15 -1.4 5,137,975 - PP_4523 0.17 -0.4 5,137,975 - PP_4523 0.17 -1.8 5,137,975 - PP_4523 0.17 -2.0 5,138,036 + PP_4523 0.23 -1.3 5,138,037 - PP_4523 0.23 -0.6 5,138,150 + PP_4523 0.35 -0.1 5,138,151 - PP_4523 0.35 -1.2 5,138,263 - PP_4523 0.47 +0.1 5,138,402 + PP_4523 0.61 -0.7 5,138,402 + PP_4523 0.61 -1.3 5,138,402 + PP_4523 0.61 -1.8 5,138,532 - PP_4523 0.75 -0.4 5,138,532 - PP_4523 0.75 -0.5 5,138,532 - +1.9 5,138,532 - PP_4523 0.75 -2.1 5,138,532 - PP_4523 0.75 -1.8
Or see this region's nucleotide sequence