Experiment: TIme6-nophage
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18915 and PS417_18920 are separated by 9 nucleotides PS417_18920 and PS417_18925 are separated by 54 nucleotides PS417_18925 and PS417_18930 are separated by 28 nucleotides PS417_18930 and PS417_18935 are separated by 26 nucleotides
PS417_18915: PS417_18915 - hypothetical protein, at 4,097,059 to 4,097,733
_18915
PS417_18920: PS417_18920 - hypothetical protein, at 4,097,743 to 4,098,474
_18920
PS417_18925: PS417_18925 - flagellar motor switch protein FliY, at 4,098,529 to 4,099,359
_18925
PS417_18930: PS417_18930 - restriction endonuclease subunit S, at 4,099,388 to 4,100,260
_18930
PS417_18935: PS417_18935 - amino acid ABC transporter ATPase, at 4,100,287 to 4,101,804
_18935
Position (kb)
4098
4099
4100 Strain fitness (log2 ratio)
-2
-1
0
1 at 4097.821 kb on - strand, within PS417_18920 at 4097.821 kb on - strand, within PS417_18920 at 4098.127 kb on - strand, within PS417_18920 at 4098.310 kb on - strand, within PS417_18920 at 4098.530 kb on + strand at 4098.531 kb on - strand at 4098.581 kb on + strand at 4098.875 kb on + strand, within PS417_18925 at 4099.026 kb on + strand, within PS417_18925 at 4099.027 kb on - strand, within PS417_18925 at 4099.027 kb on - strand, within PS417_18925 at 4099.058 kb on + strand, within PS417_18925 at 4099.058 kb on + strand, within PS417_18925 at 4099.058 kb on + strand, within PS417_18925 at 4099.059 kb on - strand, within PS417_18925 at 4099.059 kb on - strand, within PS417_18925 at 4099.059 kb on - strand, within PS417_18925 at 4099.214 kb on + strand, within PS417_18925 at 4099.214 kb on + strand, within PS417_18925 at 4099.214 kb on + strand, within PS417_18925 at 4099.215 kb on - strand, within PS417_18925 at 4099.220 kb on + strand, within PS417_18925 at 4099.339 kb on - strand at 4099.367 kb on - strand at 4100.011 kb on - strand, within PS417_18930
Per-strain Table
Position Strand Gene LocusTag Fraction TIme6-nophage remove 4,097,821 - PS417_18920 0.11 +1.3 4,097,821 - PS417_18920 0.11 -0.4 4,098,127 - PS417_18920 0.52 -0.7 4,098,310 - PS417_18920 0.77 -0.3 4,098,530 + +0.4 4,098,531 - -0.6 4,098,581 + +0.2 4,098,875 + PS417_18925 0.42 -0.3 4,099,026 + PS417_18925 0.60 -0.9 4,099,027 - PS417_18925 0.60 -0.2 4,099,027 - PS417_18925 0.60 -1.2 4,099,058 + PS417_18925 0.64 -0.0 4,099,058 + PS417_18925 0.64 -2.0 4,099,058 + PS417_18925 0.64 -0.1 4,099,059 - PS417_18925 0.64 -0.7 4,099,059 - PS417_18925 0.64 -0.7 4,099,059 - PS417_18925 0.64 -1.0 4,099,214 + PS417_18925 0.82 -1.3 4,099,214 + PS417_18925 0.82 -0.0 4,099,214 + PS417_18925 0.82 +0.3 4,099,215 - PS417_18925 0.83 -0.6 4,099,220 + PS417_18925 0.83 -1.7 4,099,339 - +1.5 4,099,367 - +0.0 4,100,011 - PS417_18930 0.71 -0.9
Or see this region's nucleotide sequence