Strain Fitness in Escherichia coli BW25113 around b2500

Experiment: RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.5x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.5x
2,619,262	+				-5.5
2,619,284	+				-3.7
2,619,362	+	purM	b2499	0.14	-5.2
2,619,501	-	purM	b2499	0.27	-4.8
2,619,662	+	purM	b2499	0.43	-1.4
2,619,662	+	purM	b2499	0.43	-4.5
2,619,832	+	purM	b2499	0.59	-4.6
2,619,832	+	purM	b2499	0.59	-3.4
2,619,835	-	purM	b2499	0.59	-4.4
2,619,923	-	purM	b2499	0.68	-2.7
2,619,923	-	purM	b2499	0.68	-3.4
2,619,971	-	purM	b2499	0.72	-3.9
2,620,035	+	purM	b2499	0.79	-3.9
2,620,035	+	purM	b2499	0.79	-3.7
2,620,043	-	purM	b2499	0.79	-3.4
2,620,164	+				-3.7
2,620,164	+				-1.4
2,620,164	+				-3.5
2,620,175	+				-3.6
2,620,258	+				-0.1
2,620,258	+				+0.1
2,620,260	+				-1.6
2,620,422	-	purN	b2500	0.26	-3.1
2,620,451	+	purN	b2500	0.31	-2.4
2,620,459	-	purN	b2500	0.32	-2.4
2,620,470	-	purN	b2500	0.33	-2.8
2,620,604	+	purN	b2500	0.54	-3.8
2,620,651	+	purN	b2500	0.62	-1.5
2,620,651	+	purN	b2500	0.62	-2.4
2,620,661	-	purN	b2500	0.63	-3.6
2,620,744	+	purN	b2500	0.76	-2.4
2,620,873	+				+0.8
2,620,873	+				+0.7
2,620,899	-				+0.9
2,620,981	+				+0.5
2,620,981	+				+0.3
2,620,989	-				-0.0
2,620,989	-				+0.2
2,620,998	-				-0.6
2,621,024	-				+0.6
2,621,032	-				+0.2
2,621,041	-				-0.0
2,621,118	-				-2.1
2,621,325	-	ppk	b2501	0.13	-1.3
2,621,325	-	ppk	b2501	0.13	-1.3
2,621,444	+	ppk	b2501	0.18	-1.6
2,621,452	+	ppk	b2501	0.19	-1.7
2,621,521	+	ppk	b2501	0.22	-1.5
2,621,521	+	ppk	b2501	0.22	-2.8
2,621,586	-	ppk	b2501	0.25	-1.0
2,621,692	-	ppk	b2501	0.30	-1.1
2,621,786	-	ppk	b2501	0.35	-2.0
2,621,786	-	ppk	b2501	0.35	-1.7
2,621,808	+	ppk	b2501	0.36	-1.8
2,621,840	-	ppk	b2501	0.37	-1.2
2,621,840	-	ppk	b2501	0.37	-0.1
2,621,850	+	ppk	b2501	0.38	-1.3
2,621,850	+	ppk	b2501	0.38	-1.7
2,621,869	+	ppk	b2501	0.39	-1.1
2,621,869	+	ppk	b2501	0.39	-0.9