Experiment: 1/2ON soft
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt bcsC and bcsZ overlap by 19 nucleotides bcsZ and bcsB are separated by 6 nucleotides
b3530: bcsC - cellulose synthase subunit (RefSeq), at 3,683,723 to 3,687,196
bcsC
b3531: bcsZ - endo-1,4-D-glucanase (NCBI), at 3,687,178 to 3,688,284
bcsZ
b3532: bcsB - regulator of cellulose synthase, cyclic di-GMP binding (NCBI), at 3,688,291 to 3,690,630
bcsB
Position (kb)
3687
3688
3689 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3686.207 kb on - strand, within bcsC at 3686.240 kb on - strand, within bcsC at 3686.267 kb on + strand, within bcsC at 3686.267 kb on + strand, within bcsC at 3686.311 kb on - strand, within bcsC at 3686.311 kb on - strand, within bcsC at 3686.311 kb on - strand, within bcsC at 3686.313 kb on + strand, within bcsC at 3686.313 kb on + strand, within bcsC at 3686.315 kb on + strand, within bcsC at 3686.321 kb on - strand, within bcsC at 3686.321 kb on - strand, within bcsC at 3686.334 kb on + strand, within bcsC at 3686.389 kb on - strand, within bcsC at 3686.493 kb on + strand, within bcsC at 3686.504 kb on + strand, within bcsC at 3686.506 kb on - strand, within bcsC at 3686.522 kb on + strand, within bcsC at 3686.525 kb on - strand, within bcsC at 3686.579 kb on + strand, within bcsC at 3686.605 kb on - strand, within bcsC at 3686.605 kb on - strand, within bcsC at 3686.621 kb on + strand, within bcsC at 3686.624 kb on - strand, within bcsC at 3686.624 kb on - strand, within bcsC at 3686.783 kb on - strand, within bcsC at 3686.783 kb on - strand, within bcsC at 3686.783 kb on - strand, within bcsC at 3686.831 kb on + strand, within bcsC at 3686.851 kb on + strand at 3686.851 kb on - strand at 3686.928 kb on - strand at 3686.928 kb on - strand at 3686.929 kb on - strand at 3686.929 kb on - strand at 3686.983 kb on - strand at 3687.083 kb on + strand at 3687.083 kb on + strand at 3687.098 kb on + strand at 3687.098 kb on + strand at 3687.127 kb on - strand at 3687.127 kb on - strand at 3687.127 kb on - strand at 3687.175 kb on + strand at 3687.204 kb on - strand at 3687.247 kb on + strand at 3687.254 kb on + strand at 3687.254 kb on + strand at 3687.254 kb on + strand at 3687.254 kb on + strand at 3687.271 kb on - strand at 3687.271 kb on - strand at 3687.272 kb on - strand at 3687.286 kb on + strand at 3687.324 kb on + strand, within bcsZ at 3687.334 kb on - strand, within bcsZ at 3687.340 kb on + strand, within bcsZ at 3687.404 kb on - strand, within bcsZ at 3687.484 kb on - strand, within bcsZ at 3687.509 kb on - strand, within bcsZ at 3687.509 kb on - strand, within bcsZ at 3687.523 kb on - strand, within bcsZ at 3687.523 kb on - strand, within bcsZ at 3687.546 kb on + strand, within bcsZ at 3687.555 kb on + strand, within bcsZ at 3687.555 kb on + strand, within bcsZ at 3687.592 kb on + strand, within bcsZ at 3687.658 kb on - strand, within bcsZ at 3687.658 kb on - strand, within bcsZ at 3687.689 kb on + strand, within bcsZ at 3687.769 kb on - strand, within bcsZ at 3687.792 kb on + strand, within bcsZ at 3687.856 kb on + strand, within bcsZ at 3687.916 kb on - strand, within bcsZ at 3687.920 kb on + strand, within bcsZ at 3687.997 kb on - strand, within bcsZ at 3688.039 kb on + strand, within bcsZ at 3688.102 kb on - strand, within bcsZ at 3688.102 kb on - strand, within bcsZ at 3688.168 kb on + strand, within bcsZ at 3688.177 kb on + strand at 3688.183 kb on - strand at 3688.198 kb on + strand at 3688.213 kb on + strand at 3688.216 kb on - strand at 3688.216 kb on - strand at 3688.217 kb on - strand at 3688.221 kb on - strand at 3688.304 kb on - strand at 3688.306 kb on - strand at 3688.352 kb on - strand at 3688.352 kb on - strand at 3688.362 kb on + strand at 3688.362 kb on + strand at 3688.363 kb on - strand at 3688.375 kb on - strand at 3688.441 kb on - strand at 3688.571 kb on + strand, within bcsB at 3688.571 kb on - strand, within bcsB at 3688.582 kb on + strand, within bcsB at 3688.583 kb on + strand, within bcsB at 3688.604 kb on - strand, within bcsB at 3688.604 kb on - strand, within bcsB at 3688.634 kb on + strand, within bcsB at 3688.634 kb on + strand, within bcsB at 3688.671 kb on - strand, within bcsB at 3688.702 kb on + strand, within bcsB at 3688.707 kb on + strand, within bcsB at 3688.727 kb on + strand, within bcsB at 3688.727 kb on + strand, within bcsB at 3688.749 kb on - strand, within bcsB at 3688.770 kb on - strand, within bcsB at 3688.778 kb on - strand, within bcsB at 3688.778 kb on - strand, within bcsB at 3688.783 kb on - strand, within bcsB at 3688.814 kb on + strand, within bcsB at 3688.814 kb on + strand, within bcsB at 3688.833 kb on + strand, within bcsB at 3688.843 kb on + strand, within bcsB at 3688.843 kb on + strand, within bcsB at 3688.861 kb on - strand, within bcsB at 3688.868 kb on + strand, within bcsB at 3688.897 kb on + strand, within bcsB at 3688.930 kb on - strand, within bcsB at 3688.944 kb on + strand, within bcsB at 3688.944 kb on + strand, within bcsB at 3688.944 kb on + strand, within bcsB at 3688.944 kb on + strand, within bcsB at 3688.981 kb on + strand, within bcsB at 3688.981 kb on + strand, within bcsB at 3689.014 kb on - strand, within bcsB at 3689.030 kb on - strand, within bcsB at 3689.030 kb on - strand, within bcsB at 3689.076 kb on + strand, within bcsB at 3689.076 kb on + strand, within bcsB at 3689.086 kb on + strand, within bcsB at 3689.125 kb on - strand, within bcsB at 3689.125 kb on - strand, within bcsB at 3689.126 kb on + strand, within bcsB at 3689.126 kb on + strand, within bcsB at 3689.134 kb on - strand, within bcsB at 3689.134 kb on - strand, within bcsB at 3689.161 kb on + strand, within bcsB at 3689.164 kb on - strand, within bcsB at 3689.164 kb on - strand, within bcsB at 3689.224 kb on - strand, within bcsB
Per-strain Table
Position Strand Gene LocusTag Fraction 1/2ON soft remove 3,686,207 - bcsC b3530 0.72 +0.4 3,686,240 - bcsC b3530 0.72 +0.1 3,686,267 + bcsC b3530 0.73 -1.5 3,686,267 + bcsC b3530 0.73 +0.2 3,686,311 - bcsC b3530 0.74 +1.3 3,686,311 - bcsC b3530 0.74 +0.1 3,686,311 - bcsC b3530 0.74 -0.2 3,686,313 + bcsC b3530 0.75 +0.1 3,686,313 + bcsC b3530 0.75 -0.1 3,686,315 + bcsC b3530 0.75 +1.1 3,686,321 - bcsC b3530 0.75 +1.1 3,686,321 - bcsC b3530 0.75 +0.0 3,686,334 + bcsC b3530 0.75 +0.8 3,686,389 - bcsC b3530 0.77 -0.2 3,686,493 + bcsC b3530 0.80 -0.1 3,686,504 + bcsC b3530 0.80 +1.9 3,686,506 - bcsC b3530 0.80 -1.3 3,686,522 + bcsC b3530 0.81 -0.0 3,686,525 - bcsC b3530 0.81 +0.5 3,686,579 + bcsC b3530 0.82 +0.4 3,686,605 - bcsC b3530 0.83 -1.7 3,686,605 - bcsC b3530 0.83 -0.3 3,686,621 + bcsC b3530 0.83 -0.1 3,686,624 - bcsC b3530 0.84 -0.2 3,686,624 - bcsC b3530 0.84 -0.5 3,686,783 - bcsC b3530 0.88 -0.0 3,686,783 - bcsC b3530 0.88 +0.3 3,686,783 - bcsC b3530 0.88 -0.1 3,686,831 + bcsC b3530 0.89 +0.5 3,686,851 + +1.4 3,686,851 - +1.2 3,686,928 - +0.4 3,686,928 - -0.1 3,686,929 - -1.5 3,686,929 - -1.3 3,686,983 - +0.1 3,687,083 + +0.6 3,687,083 + +0.3 3,687,098 + +0.5 3,687,098 + -0.9 3,687,127 - +0.2 3,687,127 - +1.1 3,687,127 - -0.1 3,687,175 + -0.2 3,687,204 - +0.7 3,687,247 + -0.2 3,687,254 + +0.0 3,687,254 + -0.1 3,687,254 + +0.7 3,687,254 + +1.0 3,687,271 - +0.2 3,687,271 - +0.7 3,687,272 - +0.0 3,687,286 + +0.8 3,687,324 + bcsZ b3531 0.13 +1.7 3,687,334 - bcsZ b3531 0.14 +0.3 3,687,340 + bcsZ b3531 0.15 -0.5 3,687,404 - bcsZ b3531 0.20 +0.7 3,687,484 - bcsZ b3531 0.28 +0.4 3,687,509 - bcsZ b3531 0.30 -0.8 3,687,509 - bcsZ b3531 0.30 +0.5 3,687,523 - bcsZ b3531 0.31 -0.0 3,687,523 - bcsZ b3531 0.31 +0.9 3,687,546 + bcsZ b3531 0.33 -0.4 3,687,555 + bcsZ b3531 0.34 +0.2 3,687,555 + bcsZ b3531 0.34 +0.5 3,687,592 + bcsZ b3531 0.37 -0.2 3,687,658 - bcsZ b3531 0.43 -1.4 3,687,658 - bcsZ b3531 0.43 +0.3 3,687,689 + bcsZ b3531 0.46 +0.6 3,687,769 - bcsZ b3531 0.53 -0.4 3,687,792 + bcsZ b3531 0.55 +0.9 3,687,856 + bcsZ b3531 0.61 +0.0 3,687,916 - bcsZ b3531 0.67 -0.0 3,687,920 + bcsZ b3531 0.67 +0.9 3,687,997 - bcsZ b3531 0.74 +1.2 3,688,039 + bcsZ b3531 0.78 -1.2 3,688,102 - bcsZ b3531 0.83 +0.7 3,688,102 - bcsZ b3531 0.83 -1.3 3,688,168 + bcsZ b3531 0.89 -0.3 3,688,177 + +0.7 3,688,183 - +1.9 3,688,198 + -0.6 3,688,213 + +0.4 3,688,216 - -0.1 3,688,216 - +0.1 3,688,217 - -0.4 3,688,221 - -0.4 3,688,304 - +0.6 3,688,306 - -2.3 3,688,352 - -0.2 3,688,352 - -0.1 3,688,362 + +1.3 3,688,362 + +0.7 3,688,363 - +0.2 3,688,375 - +0.3 3,688,441 - +1.0 3,688,571 + bcsB b3532 0.12 +0.4 3,688,571 - bcsB b3532 0.12 +0.1 3,688,582 + bcsB b3532 0.12 -1.3 3,688,583 + bcsB b3532 0.12 -0.2 3,688,604 - bcsB b3532 0.13 +0.3 3,688,604 - bcsB b3532 0.13 +0.0 3,688,634 + bcsB b3532 0.15 -0.6 3,688,634 + bcsB b3532 0.15 -0.6 3,688,671 - bcsB b3532 0.16 -0.3 3,688,702 + bcsB b3532 0.18 -0.2 3,688,707 + bcsB b3532 0.18 +0.6 3,688,727 + bcsB b3532 0.19 +0.1 3,688,727 + bcsB b3532 0.19 +0.1 3,688,749 - bcsB b3532 0.20 +0.3 3,688,770 - bcsB b3532 0.20 +0.2 3,688,778 - bcsB b3532 0.21 -1.9 3,688,778 - bcsB b3532 0.21 +0.4 3,688,783 - bcsB b3532 0.21 -0.3 3,688,814 + bcsB b3532 0.22 -0.9 3,688,814 + bcsB b3532 0.22 +0.1 3,688,833 + bcsB b3532 0.23 +0.8 3,688,843 + bcsB b3532 0.24 +0.2 3,688,843 + bcsB b3532 0.24 +0.3 3,688,861 - bcsB b3532 0.24 +0.5 3,688,868 + bcsB b3532 0.25 +1.0 3,688,897 + bcsB b3532 0.26 +0.3 3,688,930 - bcsB b3532 0.27 -1.3 3,688,944 + bcsB b3532 0.28 +0.3 3,688,944 + bcsB b3532 0.28 -0.0 3,688,944 + bcsB b3532 0.28 +0.3 3,688,944 + bcsB b3532 0.28 -1.1 3,688,981 + bcsB b3532 0.29 -0.3 3,688,981 + bcsB b3532 0.29 -0.3 3,689,014 - bcsB b3532 0.31 +0.5 3,689,030 - bcsB b3532 0.32 +0.3 3,689,030 - bcsB b3532 0.32 +0.3 3,689,076 + bcsB b3532 0.34 -0.6 3,689,076 + bcsB b3532 0.34 -0.9 3,689,086 + bcsB b3532 0.34 +0.4 3,689,125 - bcsB b3532 0.36 -0.6 3,689,125 - bcsB b3532 0.36 -0.2 3,689,126 + bcsB b3532 0.36 +0.3 3,689,126 + bcsB b3532 0.36 -0.1 3,689,134 - bcsB b3532 0.36 -1.1 3,689,134 - bcsB b3532 0.36 +0.1 3,689,161 + bcsB b3532 0.37 +0.2 3,689,164 - bcsB b3532 0.37 -0.3 3,689,164 - bcsB b3532 0.37 -0.3 3,689,224 - bcsB b3532 0.40 -0.5
Or see this region's nucleotide sequence