Strain Fitness in Escherichia coli BW25113 around b2463
Experiment: 1/2ON soft
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 1/2ON soft |
---|---|---|---|---|---|
remove | |||||
2,573,126 | + | eutP | b2461 | 0.26 | +0.2 |
2,573,186 | - | eutP | b2461 | 0.39 | -0.3 |
2,573,186 | - | eutP | b2461 | 0.39 | -0.4 |
2,573,222 | - | eutP | b2461 | 0.46 | -0.2 |
2,573,225 | + | eutP | b2461 | 0.47 | -1.3 |
2,573,225 | + | eutP | b2461 | 0.47 | +0.6 |
2,573,237 | - | eutP | b2461 | 0.49 | -0.1 |
2,573,260 | + | eutP | b2461 | 0.54 | +0.7 |
2,573,260 | + | eutP | b2461 | 0.54 | +0.2 |
2,573,278 | + | eutP | b2461 | 0.58 | +0.9 |
2,573,278 | + | eutP | b2461 | 0.58 | -0.1 |
2,573,279 | - | eutP | b2461 | 0.58 | -0.7 |
2,573,281 | + | eutP | b2461 | 0.59 | -0.9 |
2,573,281 | + | eutP | b2461 | 0.59 | +0.7 |
2,573,281 | + | eutP | b2461 | 0.59 | -1.2 |
2,573,281 | + | eutP | b2461 | 0.59 | -1.0 |
2,573,281 | + | eutP | b2461 | 0.59 | -0.5 |
2,573,281 | - | eutP | b2461 | 0.59 | +0.2 |
2,573,281 | - | eutP | b2461 | 0.59 | -0.1 |
2,573,282 | + | eutP | b2461 | 0.59 | +0.7 |
2,573,282 | + | eutP | b2461 | 0.59 | +1.5 |
2,573,283 | + | eutP | b2461 | 0.59 | -0.1 |
2,573,283 | + | eutP | b2461 | 0.59 | -0.1 |
2,573,283 | + | eutP | b2461 | 0.59 | -0.1 |
2,573,284 | - | eutP | b2461 | 0.59 | +1.5 |
2,573,286 | - | eutP | b2461 | 0.60 | +0.2 |
2,573,291 | - | eutP | b2461 | 0.61 | -0.5 |
2,573,291 | - | eutP | b2461 | 0.61 | -0.5 |
2,573,304 | + | eutP | b2461 | 0.63 | +0.5 |
2,573,304 | + | eutP | b2461 | 0.63 | -0.9 |
2,573,304 | + | eutP | b2461 | 0.63 | +0.4 |
2,573,312 | - | eutP | b2461 | 0.65 | -2.1 |
2,573,315 | + | eutP | b2461 | 0.66 | -0.2 |
2,573,355 | - | eutP | b2461 | 0.74 | +0.0 |
2,573,356 | - | eutP | b2461 | 0.74 | +0.2 |
2,573,399 | - | eutP | b2461 | 0.83 | +1.0 |
2,573,399 | - | eutP | b2461 | 0.83 | +0.1 |
2,573,459 | + | -0.6 | |||
2,573,459 | - | -0.1 | |||
2,573,459 | - | +0.9 | |||
2,573,459 | - | -1.1 | |||
2,573,496 | - | -0.0 | |||
2,573,496 | - | -0.5 | |||
2,573,496 | - | -0.3 | |||
2,573,497 | - | -0.0 | |||
2,573,550 | + | b2462 | b2462 | 0.17 | +1.2 |
2,573,560 | - | b2462 | b2462 | 0.20 | +1.5 |
2,573,562 | - | b2462 | b2462 | 0.21 | +0.1 |
2,573,562 | - | b2462 | b2462 | 0.21 | -0.8 |
2,573,562 | - | b2462 | b2462 | 0.21 | -0.4 |
2,573,572 | - | b2462 | b2462 | 0.24 | +0.8 |
2,573,572 | - | b2462 | b2462 | 0.24 | -0.1 |
2,573,581 | - | b2462 | b2462 | 0.26 | +0.5 |
2,573,581 | - | b2462 | b2462 | 0.26 | -1.1 |
2,573,604 | - | b2462 | b2462 | 0.33 | +0.5 |
2,573,606 | + | b2462 | b2462 | 0.34 | -0.1 |
2,573,751 | - | b2462 | b2462 | 0.77 | +0.4 |
2,573,774 | - | b2462 | b2462 | 0.84 | -0.8 |
2,573,774 | - | b2462 | b2462 | 0.84 | +1.3 |
2,573,775 | + | b2462 | b2462 | 0.84 | +0.3 |
2,573,783 | - | b2462 | b2462 | 0.87 | +0.0 |
2,573,784 | - | b2462 | b2462 | 0.87 | -1.0 |
2,573,792 | - | b2462 | b2462 | 0.89 | +0.0 |
2,573,818 | + | +0.3 | |||
2,573,830 | + | +0.2 | |||
2,573,830 | + | +1.1 | |||
2,573,838 | - | +1.1 | |||
2,573,838 | - | -0.1 | |||
2,573,886 | + | +0.5 | |||
2,573,928 | - | +0.9 | |||
2,573,933 | - | -0.1 | |||
2,573,963 | + | +0.9 | |||
2,573,963 | + | +0.3 | |||
2,574,083 | - | -0.1 | |||
2,574,103 | - | -0.4 | |||
2,574,133 | - | +0.1 | |||
2,574,145 | + | -1.1 | |||
2,574,148 | - | +0.2 | |||
2,574,152 | - | +0.9 | |||
2,574,158 | + | +2.2 | |||
2,574,158 | + | +0.9 | |||
2,574,170 | + | +0.5 | |||
2,574,173 | - | +0.0 | |||
2,574,187 | - | +0.2 | |||
2,574,187 | - | +0.3 | |||
2,574,190 | - | +0.4 | |||
2,574,202 | - | +0.2 | |||
2,574,216 | + | +1.2 | |||
2,574,225 | + | -0.0 | |||
2,574,233 | - | +0.6 | |||
2,574,378 | - | maeB | b2463 | 0.11 | +0.2 |
2,574,380 | + | maeB | b2463 | 0.11 | +0.5 |
2,574,575 | - | maeB | b2463 | 0.20 | +0.2 |
2,574,575 | - | maeB | b2463 | 0.20 | +1.0 |
2,574,648 | + | maeB | b2463 | 0.23 | +0.5 |
2,574,648 | + | maeB | b2463 | 0.23 | -0.1 |
2,574,711 | + | maeB | b2463 | 0.26 | +0.7 |
2,574,897 | - | maeB | b2463 | 0.34 | +0.8 |
2,574,897 | - | maeB | b2463 | 0.34 | +0.8 |
2,575,431 | + | maeB | b2463 | 0.57 | -0.1 |
2,575,439 | - | maeB | b2463 | 0.58 | +0.6 |
2,575,505 | - | maeB | b2463 | 0.61 | -0.1 |
2,575,554 | + | maeB | b2463 | 0.63 | -0.3 |
2,575,869 | + | maeB | b2463 | 0.77 | +0.7 |
2,576,054 | + | maeB | b2463 | 0.85 | +0.9 |
2,576,062 | - | maeB | b2463 | 0.85 | +0.3 |
2,576,062 | - | maeB | b2463 | 0.85 | +1.1 |
2,576,164 | + | maeB | b2463 | 0.90 | +0.5 |
2,576,174 | - | +1.1 | |||
2,576,281 | - | +1.1 | |||
2,576,376 | + | +0.9 | |||
2,576,391 | - | +1.0 | |||
2,576,391 | - | -0.1 | |||
2,576,462 | + | +0.6 | |||
2,576,472 | + | +0.7 | |||
2,576,480 | - | -0.5 | |||
2,576,480 | - | +0.6 | |||
2,576,586 | - | -0.7 | |||
2,576,853 | - | talA | b2464 | 0.17 | +0.0 |
2,576,984 | - | talA | b2464 | 0.31 | +0.5 |
2,577,042 | - | talA | b2464 | 0.37 | -0.5 |
2,577,044 | + | talA | b2464 | 0.37 | +0.2 |
2,577,044 | + | talA | b2464 | 0.37 | +0.1 |
2,577,060 | - | talA | b2464 | 0.39 | -0.1 |
2,577,060 | - | talA | b2464 | 0.39 | -0.3 |
2,577,263 | + | talA | b2464 | 0.60 | +0.5 |
2,577,266 | + | talA | b2464 | 0.61 | +0.0 |
Or see this region's nucleotide sequence