Experiment: 1/2ON soft
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeiA and mglC are separated by 242 nucleotides mglC and mglA are separated by 15 nucleotides
b2147: yeiA - putative oxidoreductase (VIMSS), at 2,233,287 to 2,234,522
yeiA
b2148: mglC - beta-methylgalactoside transporter inner membrane component (NCBI), at 2,234,765 to 2,235,775
mglC
b2149: mglA - fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI), at 2,235,791 to 2,237,311
mglA
Position (kb)
2234
2235
2236 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2233.800 kb on - strand, within yeiA at 2233.904 kb on + strand, within yeiA at 2233.963 kb on + strand, within yeiA at 2234.029 kb on + strand, within yeiA at 2234.029 kb on + strand, within yeiA at 2234.029 kb on + strand, within yeiA at 2234.037 kb on - strand, within yeiA at 2234.078 kb on - strand, within yeiA at 2234.078 kb on - strand, within yeiA at 2234.127 kb on - strand, within yeiA at 2234.145 kb on + strand, within yeiA at 2234.145 kb on + strand, within yeiA at 2234.151 kb on + strand, within yeiA at 2234.151 kb on + strand, within yeiA at 2234.155 kb on - strand, within yeiA at 2234.155 kb on - strand, within yeiA at 2234.156 kb on - strand, within yeiA at 2234.156 kb on - strand, within yeiA at 2234.228 kb on - strand, within yeiA at 2234.235 kb on - strand, within yeiA at 2234.268 kb on + strand, within yeiA at 2234.289 kb on + strand, within yeiA at 2234.289 kb on - strand, within yeiA at 2234.335 kb on + strand, within yeiA at 2234.341 kb on - strand, within yeiA at 2234.356 kb on + strand, within yeiA at 2234.387 kb on + strand, within yeiA at 2234.402 kb on + strand at 2234.461 kb on + strand at 2234.561 kb on - strand at 2234.644 kb on + strand at 2234.789 kb on - strand at 2234.823 kb on + strand at 2234.843 kb on + strand at 2234.859 kb on + strand at 2234.923 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.956 kb on - strand, within mglC at 2234.963 kb on - strand, within mglC at 2234.963 kb on - strand, within mglC at 2234.988 kb on - strand, within mglC at 2235.007 kb on + strand, within mglC at 2235.021 kb on - strand, within mglC at 2235.075 kb on + strand, within mglC at 2235.103 kb on - strand, within mglC at 2235.103 kb on - strand, within mglC at 2235.107 kb on + strand, within mglC at 2235.107 kb on + strand, within mglC at 2235.113 kb on - strand, within mglC at 2235.113 kb on - strand, within mglC at 2235.209 kb on + strand, within mglC at 2235.259 kb on + strand, within mglC at 2235.366 kb on + strand, within mglC at 2235.366 kb on + strand, within mglC at 2235.473 kb on + strand, within mglC at 2235.473 kb on + strand, within mglC at 2235.522 kb on + strand, within mglC at 2235.523 kb on - strand, within mglC at 2235.557 kb on - strand, within mglC at 2235.564 kb on + strand, within mglC at 2235.580 kb on + strand, within mglC at 2235.640 kb on + strand, within mglC at 2235.640 kb on + strand, within mglC at 2235.795 kb on - strand at 2235.805 kb on - strand at 2235.805 kb on - strand at 2235.902 kb on - strand at 2235.934 kb on - strand at 2235.998 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.007 kb on - strand, within mglA at 2236.010 kb on - strand, within mglA at 2236.067 kb on - strand, within mglA at 2236.067 kb on - strand, within mglA at 2236.147 kb on + strand, within mglA at 2236.173 kb on + strand, within mglA at 2236.249 kb on - strand, within mglA at 2236.249 kb on - strand, within mglA at 2236.284 kb on - strand, within mglA at 2236.331 kb on + strand, within mglA at 2236.331 kb on + strand, within mglA at 2236.331 kb on - strand, within mglA at 2236.356 kb on - strand, within mglA at 2236.364 kb on - strand, within mglA at 2236.387 kb on - strand, within mglA at 2236.421 kb on - strand, within mglA at 2236.446 kb on + strand, within mglA at 2236.466 kb on - strand, within mglA at 2236.478 kb on - strand, within mglA at 2236.510 kb on - strand, within mglA at 2236.510 kb on - strand, within mglA at 2236.559 kb on + strand, within mglA at 2236.579 kb on - strand, within mglA at 2236.579 kb on - strand, within mglA at 2236.626 kb on - strand, within mglA at 2236.697 kb on + strand, within mglA at 2236.697 kb on + strand, within mglA
Per-strain Table
Position Strand Gene LocusTag Fraction 1/2ON soft remove 2,233,800 - yeiA b2147 0.42 +1.6 2,233,904 + yeiA b2147 0.50 -0.6 2,233,963 + yeiA b2147 0.55 +0.9 2,234,029 + yeiA b2147 0.60 -1.2 2,234,029 + yeiA b2147 0.60 +0.2 2,234,029 + yeiA b2147 0.60 +1.3 2,234,037 - yeiA b2147 0.61 +0.4 2,234,078 - yeiA b2147 0.64 +1.7 2,234,078 - yeiA b2147 0.64 -0.1 2,234,127 - yeiA b2147 0.68 -0.8 2,234,145 + yeiA b2147 0.69 -0.8 2,234,145 + yeiA b2147 0.69 +0.5 2,234,151 + yeiA b2147 0.70 -0.2 2,234,151 + yeiA b2147 0.70 -0.1 2,234,155 - yeiA b2147 0.70 -0.1 2,234,155 - yeiA b2147 0.70 +1.4 2,234,156 - yeiA b2147 0.70 -0.8 2,234,156 - yeiA b2147 0.70 +0.3 2,234,228 - yeiA b2147 0.76 +0.5 2,234,235 - yeiA b2147 0.77 +0.3 2,234,268 + yeiA b2147 0.79 -0.2 2,234,289 + yeiA b2147 0.81 -0.6 2,234,289 - yeiA b2147 0.81 -0.7 2,234,335 + yeiA b2147 0.85 -0.5 2,234,341 - yeiA b2147 0.85 +1.4 2,234,356 + yeiA b2147 0.86 -0.0 2,234,387 + yeiA b2147 0.89 +0.0 2,234,402 + -0.5 2,234,461 + +0.6 2,234,561 - -0.8 2,234,644 + +0.0 2,234,789 - +0.3 2,234,823 + +1.5 2,234,843 + -1.1 2,234,859 + -0.7 2,234,923 + mglC b2148 0.16 -0.5 2,234,944 + mglC b2148 0.18 +0.7 2,234,944 + mglC b2148 0.18 +0.9 2,234,944 + mglC b2148 0.18 -1.5 2,234,944 + mglC b2148 0.18 -1.2 2,234,956 - mglC b2148 0.19 -0.1 2,234,963 - mglC b2148 0.20 +0.5 2,234,963 - mglC b2148 0.20 -0.8 2,234,988 - mglC b2148 0.22 +0.9 2,235,007 + mglC b2148 0.24 +0.1 2,235,021 - mglC b2148 0.25 +0.3 2,235,075 + mglC b2148 0.31 +0.8 2,235,103 - mglC b2148 0.33 -0.1 2,235,103 - mglC b2148 0.33 -1.1 2,235,107 + mglC b2148 0.34 -0.7 2,235,107 + mglC b2148 0.34 +1.2 2,235,113 - mglC b2148 0.34 -0.4 2,235,113 - mglC b2148 0.34 +0.2 2,235,209 + mglC b2148 0.44 +0.1 2,235,259 + mglC b2148 0.49 +0.3 2,235,366 + mglC b2148 0.59 -0.8 2,235,366 + mglC b2148 0.59 -1.4 2,235,473 + mglC b2148 0.70 +0.4 2,235,473 + mglC b2148 0.70 +1.9 2,235,522 + mglC b2148 0.75 +0.1 2,235,523 - mglC b2148 0.75 +0.6 2,235,557 - mglC b2148 0.78 -0.2 2,235,564 + mglC b2148 0.79 -1.1 2,235,580 + mglC b2148 0.81 +1.1 2,235,640 + mglC b2148 0.87 -1.1 2,235,640 + mglC b2148 0.87 -0.1 2,235,795 - +0.3 2,235,805 - -0.1 2,235,805 - -1.7 2,235,902 - -2.5 2,235,934 - -2.1 2,235,998 - mglA b2149 0.14 -0.8 2,236,005 - mglA b2149 0.14 -0.5 2,236,005 - mglA b2149 0.14 -1.7 2,236,005 - mglA b2149 0.14 -1.4 2,236,005 - mglA b2149 0.14 -1.4 2,236,005 - mglA b2149 0.14 +0.9 2,236,005 - mglA b2149 0.14 -1.8 2,236,007 - mglA b2149 0.14 -1.4 2,236,010 - mglA b2149 0.14 -1.1 2,236,067 - mglA b2149 0.18 -2.9 2,236,067 - mglA b2149 0.18 +0.5 2,236,147 + mglA b2149 0.23 -0.1 2,236,173 + mglA b2149 0.25 -0.1 2,236,249 - mglA b2149 0.30 +0.9 2,236,249 - mglA b2149 0.30 -0.6 2,236,284 - mglA b2149 0.32 -0.2 2,236,331 + mglA b2149 0.36 -0.1 2,236,331 + mglA b2149 0.36 -0.1 2,236,331 - mglA b2149 0.36 -0.2 2,236,356 - mglA b2149 0.37 +0.7 2,236,364 - mglA b2149 0.38 -0.1 2,236,387 - mglA b2149 0.39 -0.6 2,236,421 - mglA b2149 0.41 -1.1 2,236,446 + mglA b2149 0.43 -0.1 2,236,466 - mglA b2149 0.44 +0.4 2,236,478 - mglA b2149 0.45 +0.1 2,236,510 - mglA b2149 0.47 +0.2 2,236,510 - mglA b2149 0.47 +1.7 2,236,559 + mglA b2149 0.50 -0.3 2,236,579 - mglA b2149 0.52 -1.7 2,236,579 - mglA b2149 0.52 -0.7 2,236,626 - mglA b2149 0.55 -0.6 2,236,697 + mglA b2149 0.60 +0.9 2,236,697 + mglA b2149 0.60 -0.1
Or see this region's nucleotide sequence