Strain Fitness in Pseudomonas simiae WCS417 around PS417_00365

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
70,178	-				-1.8
70,204	-				+0.0
70,204	-				-0.5
70,260	+				-0.9
70,372	-				-0.1
70,372	-				+0.9
70,375	+				-0.0
70,375	+				-2.1
70,376	-				+0.7
70,376	-				-0.9
70,376	-				+2.9
70,376	-				+0.2
70,376	-				+0.6
70,376	-				+1.5
70,376	-				-0.0
70,376	-				-0.1
70,452	-				+0.2
70,452	-				-0.3
70,768	-		PS417_00365	0.14	-1.1
70,780	-		PS417_00365	0.15	-1.1
70,832	+		PS417_00365	0.17	+1.9
70,890	-		PS417_00365	0.20	+0.9
70,920	-		PS417_00365	0.21	+0.3
71,184	-		PS417_00365	0.33	+0.1
71,184	-		PS417_00365	0.33	-2.3
71,308	-		PS417_00365	0.39	+1.6
71,350	-		PS417_00365	0.41	-3.5
71,378	+		PS417_00365	0.43	+1.7
71,602	-		PS417_00365	0.53	-0.3
71,681	+		PS417_00365	0.57	-0.2
71,736	+		PS417_00365	0.59	+1.7
71,736	+		PS417_00365	0.59	+0.2
71,737	-				-1.1
71,937	+		PS417_00365	0.69	-2.2
71,937	+		PS417_00365	0.69	+1.0
71,938	-		PS417_00365	0.69	+1.4
71,939	+		PS417_00365	0.69	+1.2
71,940	-		PS417_00365	0.69	-1.2
71,940	-		PS417_00365	0.69	+1.2
72,320	+		PS417_00365	0.87	-0.1
72,423	+				+1.2
72,424	-				-0.3
72,424	-				-1.5
72,444	-				-0.2
72,584	+				-2.8
72,585	-				+0.7
72,591	-				+0.5
73,183	-		PS417_00370	0.66	+0.6
73,440	+				+0.6
73,465	+				+0.8