Strain Fitness in Pseudomonas simiae WCS417 around PS417_28170

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
6,082,803	+		PS417_28165	0.43	+0.7
6,083,072	+		PS417_28165	0.61	+0.3
6,083,073	-		PS417_28165	0.61	-1.1
6,083,073	-		PS417_28165	0.61	+0.8
6,083,073	-		PS417_28165	0.61	-1.3
6,083,073	-		PS417_28165	0.61	-1.9
6,083,076	+		PS417_28165	0.61	-1.7
6,083,421	+		PS417_28165	0.83	+0.6
6,083,463	+		PS417_28165	0.86	-0.2
6,083,464	-		PS417_28165	0.86	+1.3
6,083,464	-		PS417_28165	0.86	+0.2
6,083,592	+				+1.2
6,083,592	+				+0.2
6,083,593	-				-1.5
6,083,593	-				-1.8
6,083,708	+				-1.7
6,083,708	+				+0.3
6,083,709	-				-0.2
6,083,721	+				-0.1
6,083,731	-				-1.9
6,083,765	+				-0.6
6,083,765	+				-0.0
6,083,765	+				+0.8
6,083,765	+				+0.1
6,083,766	-				-0.8
6,083,766	-				+0.0
6,084,011	+		PS417_28170	0.39	+1.7
6,084,011	+		PS417_28170	0.39	+0.4
6,084,012	-		PS417_28170	0.39	+2.2
6,084,074	+		PS417_28170	0.49	-0.1
6,084,075	-		PS417_28170	0.49	-0.2
6,084,108	+		PS417_28170	0.54	-0.1
6,084,213	-		PS417_28170	0.71	+1.1
6,084,466	+		PS417_28175	0.15	-0.2
6,084,466	+		PS417_28175	0.15	-0.2
6,084,467	-		PS417_28175	0.16	-0.3
6,084,479	-		PS417_28175	0.18	-0.7
6,084,547	-		PS417_28175	0.34	+0.8
6,084,550	+		PS417_28175	0.34	+1.1
6,084,600	+		PS417_28175	0.45	-1.4
6,084,600	+		PS417_28175	0.45	-0.0
6,085,013	+		PS417_28180	0.24	-1.2
6,085,013	+		PS417_28180	0.24	+0.2
6,085,014	-		PS417_28180	0.24	+0.3
6,085,091	+		PS417_28180	0.35	-0.4
6,085,129	-		PS417_28180	0.41	-0.8
6,085,242	-		PS417_28180	0.58	+1.7
6,085,242	-		PS417_28180	0.58	+1.2
6,085,242	-		PS417_28180	0.58	-0.8
6,085,256	+		PS417_28180	0.60	-2.7
6,085,256	+		PS417_28180	0.60	-0.6
6,085,257	-		PS417_28180	0.60	+0.8
6,085,257	-		PS417_28180	0.60	+0.3
6,085,322	+		PS417_28180	0.70	-1.3
6,085,322	+		PS417_28180	0.70	-0.1