Strain Fitness in Pseudomonas simiae WCS417 around PS417_27260

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
5,882,829	+		PS417_27255	0.28	-0.2
5,883,222	-		PS417_27255	0.64	-0.5
5,883,359	+		PS417_27255	0.77	-1.2
5,883,359	+		PS417_27255	0.77	-0.5
5,883,410	+		PS417_27255	0.81	-0.5
5,883,466	+		PS417_27255	0.86	+0.0
5,883,466	+		PS417_27255	0.86	-2.4
5,883,466	+		PS417_27255	0.86	+0.8
5,883,466	+		PS417_27255	0.86	-2.3
5,883,466	+		PS417_27255	0.86	+0.3
5,883,467	-		PS417_27255	0.87	-0.5
5,883,467	-		PS417_27255	0.87	-1.0
5,883,590	+				-0.2
5,883,651	+				-0.2
5,883,678	-				-2.6
5,883,743	+				-0.4
5,883,756	+				+0.9
5,883,822	+				-1.5
5,884,139	-		PS417_27260	0.23	-1.4
5,884,234	+		PS417_27260	0.29	-0.1
5,884,285	+		PS417_27260	0.32	+0.1
5,884,630	+		PS417_27260	0.53	+1.3
5,884,714	+		PS417_27260	0.59	-1.9
5,884,714	+		PS417_27260	0.59	-1.2
5,884,715	-		PS417_27260	0.59	+0.7
5,884,715	-		PS417_27260	0.59	-0.0
5,884,715	-		PS417_27260	0.59	-1.5
5,884,823	+		PS417_27260	0.65	-0.9
5,884,930	+		PS417_27260	0.72	-0.1
5,884,936	+		PS417_27260	0.72	-0.2
5,884,936	+		PS417_27260	0.72	-0.4
5,884,937	-		PS417_27260	0.72	-2.5
5,884,943	-		PS417_27260	0.73	-0.2
5,885,086	+		PS417_27260	0.82	-0.3
5,885,087	-		PS417_27260	0.82	-0.4
5,885,285	+				+0.4
5,885,357	-				-0.6
5,885,549	+				-1.4
5,885,888	+		PS417_27265	0.34	+0.6
5,885,889	-		PS417_27265	0.34	-0.7
5,885,889	-		PS417_27265	0.34	+0.8
5,885,889	-		PS417_27265	0.34	+1.2
5,885,889	-		PS417_27265	0.34	-0.5
5,885,891	+		PS417_27265	0.34	-0.2
5,885,891	+		PS417_27265	0.34	+0.6
5,885,891	+		PS417_27265	0.34	-0.5
5,885,892	-		PS417_27265	0.34	+0.2
5,885,892	-		PS417_27265	0.34	+0.9
5,885,895	+		PS417_27265	0.35	-1.8
5,885,895	+		PS417_27265	0.35	+0.1
5,886,060	-		PS417_27265	0.51	+0.0
5,886,122	+		PS417_27265	0.57	+0.2
5,886,122	+		PS417_27265	0.57	-1.2
5,886,122	+		PS417_27265	0.57	+1.0
5,886,123	-		PS417_27265	0.57	+0.5
5,886,201	+		PS417_27265	0.65	-0.7
5,886,202	-				+0.6
5,886,202	-		PS417_27265	0.65	-1.1