Strain Fitness in Pseudomonas simiae WCS417 around PS417_27035

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
5,836,787	+				+0.4
5,836,788	-				-1.2
5,836,890	-				-0.3
5,837,594	-		PS417_27030	0.89	-0.2
5,837,649	+				+0.7
5,837,649	+				+0.3
5,837,649	+				-0.0
5,837,649	+				-0.5
5,837,649	+				+0.7
5,837,649	+				+0.4
5,837,649	+				+0.6
5,837,650	-				-0.7
5,837,650	-				+0.1
5,837,662	-				+0.6
5,837,760	+				-0.3
5,837,787	+				-0.5
5,838,511	+		PS417_27035	0.59	+0.5
5,838,703	-		PS417_27035	0.73	+0.2
5,838,805	+		PS417_27035	0.80	+2.0
5,838,805	+		PS417_27035	0.80	-1.9
5,838,806	-		PS417_27035	0.80	+2.4
5,838,806	-		PS417_27035	0.80	+0.7
5,838,806	-		PS417_27035	0.80	-2.0
5,838,806	-		PS417_27035	0.80	+2.7
5,839,055	+				-0.7
5,839,055	+				-1.7
5,839,141	+				-0.6
5,839,141	+				+0.2
5,839,142	-				+0.5
5,839,142	-				-0.3
5,839,142	-				-1.4
5,839,162	-				-1.3
5,839,162	-				+0.2
5,839,171	+				+1.2
5,839,398	+				+0.5
5,839,398	+				+0.2
5,839,399	-				+0.1
5,839,399	-				+1.3
5,839,399	-				+0.4
5,839,399	-				-0.7
5,839,828	-		PS417_27040	0.44	-1.2