Strain Fitness in Pseudomonas simiae WCS417 around PS417_24190

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
5,246,277	+				+1.7
5,246,388	+				-0.3
5,246,394	+				-2.4
5,246,416	+				+0.8
5,246,416	+				-0.2
5,246,416	+				+0.7
5,246,416	+				+0.0
5,246,416	+				+0.3
5,246,417	-				+0.6
5,246,417	-				+0.6
5,246,417	-				-1.0
5,246,417	-				+1.6
5,246,417	-				-0.3
5,246,417	-				-3.5
5,246,417	-				+1.1
5,246,417	-				+0.2
5,246,518	+				+0.6
5,246,519	-				-1.3
5,246,543	+				-0.7
5,246,583	+				+0.8
5,246,583	+				+2.1
5,246,583	+				+0.3
5,246,601	+				-0.9
5,246,601	+				-0.9
5,246,668	-				-0.3
5,246,678	+				+0.2
5,246,678	+				+0.3
5,246,678	+				+2.1
5,246,679	-				-0.7
5,246,704	+				+0.2
5,246,704	+				+0.5
5,246,705	-				+0.6
5,246,705	-				-1.1
5,246,792	+		PS417_24185	0.27	+1.4
5,246,793	-		PS417_24185	0.28	+0.0
5,246,793	-		PS417_24185	0.28	-0.2
5,246,808	+		PS417_24185	0.33	+0.9
5,246,808	+		PS417_24185	0.33	-1.6
5,247,078	-				-0.2
5,247,274	+				-0.2
5,247,275	-		PS417_24190	0.10	+0.5
5,247,332	-		PS417_24190	0.17	-0.3
5,247,361	-		PS417_24190	0.20	+0.7
5,247,361	-		PS417_24190	0.20	+0.2
5,247,425	-		PS417_24190	0.28	+0.2
5,247,455	-		PS417_24190	0.31	+0.6
5,247,488	+		PS417_24190	0.35	+0.1
5,247,489	-		PS417_24190	0.35	+0.5
5,247,489	-		PS417_24190	0.35	-0.0
5,247,492	+		PS417_24190	0.35	+0.1
5,247,492	+		PS417_24190	0.35	+0.7
5,247,493	-		PS417_24190	0.36	+1.1
5,247,493	-		PS417_24190	0.36	-0.0
5,247,625	+		PS417_24190	0.51	-0.7
5,247,675	+		PS417_24190	0.57	+1.7
5,247,676	-		PS417_24190	0.57	-1.7
5,247,676	-		PS417_24190	0.57	-0.6
5,247,786	-		PS417_24190	0.70	+0.0
5,247,940	+		PS417_24190	0.88	+0.4
5,247,941	-		PS417_24190	0.88	-0.1
5,247,941	-		PS417_24190	0.88	+0.7
5,247,941	-		PS417_24190	0.88	+1.5
5,247,941	-		PS417_24190	0.88	+0.3
5,247,941	-		PS417_24190	0.88	-0.7
5,247,941	-		PS417_24190	0.88	-0.9
5,247,941	-		PS417_24190	0.88	-0.7
5,248,043	+				+0.1
5,248,044	-				+0.4
5,248,057	+				-0.3
5,248,058	-				-1.2
5,248,069	+				-1.1
5,248,070	-				-1.4
5,248,112	+				-0.7
5,248,140	-				-0.1
5,248,161	-				-2.0
5,248,161	-				+5.3
5,248,166	-				-0.5
5,248,200	+				-0.1
5,248,209	+				+0.6
5,248,210	-				-0.3
5,248,262	+		PS417_24195	0.11	+0.1
5,248,263	-		PS417_24195	0.11	-0.1
5,248,264	+		PS417_24195	0.11	+0.7
5,248,264	+		PS417_24195	0.11	+0.5
5,248,265	-		PS417_24195	0.12	+0.7
5,248,270	+		PS417_24195	0.13	-1.4
5,248,270	+		PS417_24195	0.13	-0.8
5,248,270	+		PS417_24195	0.13	+0.4
5,248,375	+		PS417_24195	0.32	-0.1
5,248,375	+		PS417_24195	0.32	+0.0
5,248,375	+		PS417_24195	0.32	-0.1
5,248,376	-		PS417_24195	0.32	+0.6
5,248,376	-		PS417_24195	0.32	-0.6
5,248,376	-		PS417_24195	0.32	+0.0
5,248,376	-		PS417_24195	0.32	+0.9
5,248,376	-		PS417_24195	0.32	+0.6
5,248,376	-		PS417_24195	0.32	-0.4
5,248,431	-		PS417_24195	0.42	-0.4
5,248,476	-		PS417_24195	0.50	+1.1
5,248,476	-		PS417_24195	0.50	-1.0
5,248,476	-		PS417_24195	0.50	+0.4
5,248,588	+		PS417_24195	0.70	-0.4
5,248,667	-		PS417_24195	0.85	-0.4
5,248,667	-		PS417_24195	0.85	+0.5
5,248,747	+				-3.0
5,248,779	+				-0.6
5,248,780	-				-0.9
5,248,780	-				+0.2
5,248,802	-				+1.3
5,248,815	-				-0.5
5,248,815	-				+0.7
5,248,838	+				-1.4
5,248,975	+				+0.0
5,248,984	-		PS417_24200	0.21	-2.5
5,248,987	-		PS417_24200	0.21	-0.3
5,248,990	-		PS417_24200	0.22	-0.2
5,248,990	-		PS417_24200	0.22	+2.5
5,248,990	-		PS417_24200	0.22	+0.1