Strain Fitness in Pseudomonas simiae WCS417 around PS417_22630

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
4,898,787	+				+0.8
4,898,972	+				+0.4
4,898,973	-				-2.3
4,899,028	+		PS417_22625	0.16	-1.7
4,899,029	-		PS417_22625	0.16	+1.0
4,899,303	+		PS417_22625	0.53	+0.3
4,899,303	+		PS417_22625	0.53	-1.5
4,899,303	+		PS417_22625	0.53	-0.7
4,899,304	-		PS417_22625	0.53	+1.8
4,899,304	-		PS417_22625	0.53	-1.0
4,899,334	+		PS417_22625	0.57	+0.3
4,899,334	+		PS417_22625	0.57	-2.2
4,899,334	+		PS417_22625	0.57	-0.0
4,899,335	-		PS417_22625	0.57	+0.5
4,899,409	-		PS417_22625	0.67	+2.2
4,899,561	+		PS417_22625	0.87	+0.2
4,899,561	+		PS417_22625	0.87	-0.6
4,899,561	+		PS417_22625	0.87	+1.0
4,899,562	-		PS417_22625	0.87	+1.0
4,899,562	-		PS417_22625	0.87	-1.9
4,899,562	-		PS417_22625	0.87	+0.4
4,899,562	-		PS417_22625	0.87	+0.1
4,899,792	-		PS417_22630	0.11	+0.6
4,899,792	-		PS417_22630	0.11	+1.3
4,899,919	-		PS417_22630	0.25	+1.3
4,900,068	+		PS417_22630	0.41	+0.6
4,900,525	-				+0.5
4,900,618	+				+1.2
4,900,618	+				+0.2
4,900,619	-				-2.2
4,900,620	+				+0.0
4,900,621	-				+0.3
4,900,621	-				-0.5
4,900,621	-				-1.0
4,900,621	-				-0.4
4,900,621	-				-1.9
4,900,621	-				-1.0
4,900,621	-				+1.4
4,900,621	-				+0.5
4,900,679	-				+0.4
4,900,679	-				+0.5
4,900,726	+				-0.7
4,900,819	+				-0.2
4,900,819	+				-0.5
4,900,820	-				-0.6