Strain Fitness in Pseudomonas simiae WCS417 around PS417_20445

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
4,438,674	-		PS417_20440	0.45	-0.6
4,438,686	+		PS417_20440	0.45	+0.1
4,438,707	-		PS417_20440	0.47	+0.2
4,438,797	+		PS417_20440	0.53	-0.1
4,438,797	+		PS417_20440	0.53	+0.5
4,438,908	-		PS417_20440	0.61	-2.0
4,438,975	+		PS417_20440	0.66	+0.5
4,439,177	-		PS417_20440	0.81	+0.7
4,439,181	+		PS417_20440	0.81	-0.1
4,439,213	+		PS417_20440	0.83	-0.4
4,439,410	+				+0.2
4,439,444	+				+0.2
4,439,468	+				-0.4
4,439,507	+				+0.8
4,439,547	+				+0.1
4,439,547	+				-0.4
4,439,679	+		PS417_20445	0.11	+0.3
4,439,697	+		PS417_20445	0.14	+0.3
4,439,697	+		PS417_20445	0.14	+0.4
4,439,727	+		PS417_20445	0.17	+0.3
4,439,767	-		PS417_20445	0.22	+0.3
4,439,869	+		PS417_20445	0.34	-0.2
4,439,869	+		PS417_20445	0.34	+1.5
4,439,962	+		PS417_20445	0.45	-0.4
4,439,964	+		PS417_20445	0.45	-1.3
4,439,964	+		PS417_20445	0.45	+0.1
4,439,964	+		PS417_20445	0.45	+0.4
4,439,964	+		PS417_20445	0.45	+1.7
4,439,965	-		PS417_20445	0.45	+0.0
4,439,965	-		PS417_20445	0.45	+0.4
4,439,965	-		PS417_20445	0.45	+0.0
4,440,000	-		PS417_20445	0.49	-0.1
4,440,086	+		PS417_20445	0.60	-2.0
4,440,086	+		PS417_20445	0.60	-3.1
4,440,087	-		PS417_20445	0.60	+1.7
4,440,087	-		PS417_20445	0.60	+0.1
4,440,201	+		PS417_20445	0.73	-0.9
4,440,202	-		PS417_20445	0.73	+0.9
4,440,202	-		PS417_20445	0.73	+1.0
4,440,505	+				+0.6
4,440,505	+				-2.0
4,440,507	+				+3.0
4,440,507	+				+1.1
4,440,508	-				+0.4
4,440,512	+				+0.2
4,440,527	+				+0.7
4,440,631	-		PS417_20450	0.21	-0.1
4,440,631	-		PS417_20450	0.21	-0.6
4,440,633	+		PS417_20450	0.21	+0.1
4,440,633	+		PS417_20450	0.21	+0.4
4,440,634	-		PS417_20450	0.21	-0.3
4,440,634	-				-0.1
4,440,778	-				+0.5
4,440,778	-		PS417_20450	0.37	+0.4
4,440,778	-		PS417_20450	0.37	-0.1
4,440,880	+		PS417_20450	0.47	+1.5
4,440,881	-		PS417_20450	0.48	+0.1
4,440,971	+		PS417_20450	0.57	+0.3
4,440,971	+		PS417_20450	0.57	+0.8
4,440,972	-		PS417_20450	0.57	-0.3
4,441,014	+		PS417_20450	0.62	+1.9
4,441,014	+		PS417_20450	0.62	-1.5
4,441,014	+		PS417_20450	0.62	-0.5
4,441,014	+		PS417_20450	0.62	-0.1
4,441,109	+		PS417_20450	0.72	-0.9
4,441,110	-		PS417_20450	0.72	+1.5
4,441,137	+		PS417_20450	0.75	+0.4
4,441,137	+		PS417_20450	0.75	+0.0
4,441,138	-		PS417_20450	0.75	-0.2
4,441,138	-		PS417_20450	0.75	-1.2
4,441,138	-		PS417_20450	0.75	+0.7
4,441,141	+		PS417_20450	0.75	-0.3
4,441,142	-		PS417_20450	0.76	+0.4
4,441,151	+		PS417_20450	0.77	+0.0
4,441,200	+		PS417_20450	0.82	-0.3
4,441,200	+		PS417_20450	0.82	-0.4
4,441,200	+		PS417_20450	0.82	+0.3
4,441,201	-		PS417_20450	0.82	+0.1
4,441,201	-				-0.3
4,441,201	-		PS417_20450	0.82	+0.4
4,441,218	+		PS417_20450	0.84	+0.8
4,441,219	-		PS417_20450	0.84	-2.0
4,441,219	-		PS417_20450	0.84	+0.1
4,441,411	+				-0.3