Strain Fitness in Pseudomonas simiae WCS417 around PS417_19800

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
4,297,926	+		PS417_19795	0.33	+0.1
4,297,926	+		PS417_19795	0.33	+0.7
4,297,927	-		PS417_19795	0.33	+1.0
4,297,927	-		PS417_19795	0.33	+0.7
4,297,934	+		PS417_19795	0.34	+0.3
4,297,934	+		PS417_19795	0.34	+0.3
4,297,935	-		PS417_19795	0.34	+0.1
4,297,935	-		PS417_19795	0.34	+0.2
4,297,935	-		PS417_19795	0.34	-0.1
4,298,227	-		PS417_19795	0.72	+0.2
4,298,243	-		PS417_19795	0.75	-0.7
4,298,449	+				+0.3
4,298,449	+				+0.3
4,298,449	+				+0.6
4,298,449	+				+0.2
4,298,449	+				+0.8
4,298,450	-				-2.1
4,298,450	-				-0.8
4,299,220	+				-1.1
4,299,221	-		PS417_19800	0.76	-3.0
4,299,221	-		PS417_19800	0.76	-4.3
4,299,555	-				-2.7
4,299,800	+		PS417_19805	0.19	-0.8