Strain Fitness in Pseudomonas simiae WCS417 around PS417_19675

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
4,274,581	-		PS417_19665	0.85	-1.3
4,274,581	-		PS417_19665	0.85	-1.1
4,274,610	+		PS417_19665	0.88	-0.4
4,274,610	+		PS417_19665	0.88	+0.3
4,274,723	+				-0.5
4,274,723	+				-1.5
4,274,724	-				+1.7
4,274,724	-				-0.1
4,274,724	-				-1.2
4,274,724	-				+0.9
4,274,800	+				-0.7
4,274,901	+		PS417_19670	0.23	+2.9
4,275,075	+		PS417_19670	0.46	+0.7
4,275,231	-		PS417_19670	0.67	-0.8
4,275,411	+				-1.9
4,275,518	+				-1.2
4,275,566	+				+0.5
4,275,567	-				-0.2
4,275,734	+		PS417_19675	0.23	+0.6
4,275,735	-		PS417_19675	0.23	-0.1
4,276,008	+		PS417_19675	0.48	-2.4
4,276,027	-		PS417_19675	0.49	+0.5
4,276,027	-		PS417_19675	0.49	-1.5
4,276,029	-		PS417_19675	0.49	-0.5
4,276,029	-		PS417_19675	0.49	-2.5
4,276,194	+		PS417_19675	0.64	-1.5
4,276,434	-		PS417_19675	0.85	-2.7
4,276,599	+				+0.5
4,277,243	+		PS417_19680	0.27	+0.7
4,277,244	-		PS417_19680	0.27	+0.5
4,277,244	-		PS417_19680	0.27	+0.5