Strain Fitness in Pseudomonas simiae WCS417 around PS417_19325
Experiment: P. simiae ORA MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | P. simiae ORA MOI 1 |
---|---|---|---|---|---|
remove | |||||
4,191,340 | - | PS417_19325 | 0.26 | -0.1 | |
4,191,450 | + | PS417_19325 | 0.40 | -0.1 | |
4,191,450 | + | PS417_19325 | 0.40 | -2.2 | |
4,191,669 | + | PS417_19325 | 0.67 | -1.4 | |
4,191,983 | + | -0.3 | |||
4,191,983 | + | -0.5 | |||
4,191,984 | - | +0.1 | |||
4,192,011 | - | -0.3 | |||
4,192,011 | - | -0.1 | |||
4,192,011 | - | +1.5 | |||
4,192,018 | + | +0.2 | |||
4,192,057 | - | -0.2 | |||
4,192,079 | + | +0.2 | |||
4,192,717 | - | PS417_19330 | 0.72 | -1.3 |
Or see this region's nucleotide sequence