Strain Fitness in Pseudomonas simiae WCS417 around PS417_18025

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
3,929,151	-				+0.6
3,929,302	+		PS417_18020	0.41	-0.6
3,929,303	-		PS417_18020	0.41	+2.4
3,929,547	-				-1.7
3,929,623	+				+0.0
3,929,623	+				+0.2
3,929,643	-				-1.3
3,929,710	-				+0.0
3,929,722	-				+1.0
3,929,728	+				-1.4
3,929,857	-		PS417_18025	0.24	-1.9
3,929,858	+		PS417_18025	0.24	+1.0
3,929,859	-		PS417_18025	0.25	+1.5
3,929,859	-		PS417_18025	0.25	+1.1
3,930,007	+		PS417_18025	0.64	+0.5
3,930,008	-		PS417_18025	0.64	+2.4
3,930,008	-				-0.6
3,930,059	-		PS417_18025	0.78	+1.0
3,930,059	-		PS417_18025	0.78	+2.2
3,930,111	+				-0.1
3,930,302	+				+0.4
3,930,306	+				-2.5
3,930,306	+				-0.6
3,930,306	+				+0.1
3,930,307	-				+0.4
3,930,307	-				+0.4
3,930,307	-				-1.2
3,930,307	-				-0.7
3,930,307	-				+0.8
3,930,307	-				+0.0
3,930,307	-				-0.2
3,930,312	+				-0.4
3,930,312	+				-0.3
3,930,312	+				+0.6
3,930,313	-				+0.5
3,930,394	+				-0.2
3,930,394	+				+0.0
3,930,401	-				-0.3
3,930,483	+				-0.0
3,930,622	+		PS417_18035	0.15	+0.4
3,930,623	-		PS417_18035	0.15	-0.3
3,930,666	+		PS417_18035	0.17	-0.6
3,930,666	+		PS417_18035	0.17	+0.3
3,930,666	+		PS417_18035	0.17	+0.5
3,930,666	+		PS417_18035	0.17	+0.4
3,930,667	-		PS417_18035	0.17	+0.3
3,930,726	+		PS417_18035	0.20	+0.0
3,930,726	+		PS417_18035	0.20	+0.0
3,930,922	-		PS417_18035	0.29	+0.4