Strain Fitness in Pseudomonas simiae WCS417 around PS417_16055

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
3,517,452	-				+0.6
3,517,452	-				+0.4
3,517,526	+				-0.4
3,517,559	-				-1.6
3,517,664	+				-0.1
3,517,664	+				+0.9
3,518,243	-		PS417_16050	0.75	+0.2
3,518,256	+		PS417_16050	0.77	+0.7
3,518,470	-				+1.3
3,518,542	+		PS417_16055	0.24	-2.2
3,518,542	+		PS417_16055	0.24	-0.6
3,518,543	-		PS417_16055	0.25	-0.6
3,518,975	-		PS417_16060	0.12	-0.6
3,519,178	+		PS417_16060	0.41	+0.1
3,519,178	+				+2.1
3,519,179	-		PS417_16060	0.41	-0.1
3,519,313	+		PS417_16060	0.60	+1.3
3,519,566	+				+1.0
3,519,566	+				-0.7
3,519,567	-				+0.3
3,519,567	-				+0.3
3,519,636	-				+2.9