Strain Fitness in Pseudomonas simiae WCS417 around PS417_15530

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
3,398,690	+				+0.2
3,398,913	+		PS417_15525	0.17	+0.9
3,398,913	+		PS417_15525	0.17	-1.3
3,398,913	+		PS417_15525	0.17	+0.4
3,398,913	+		PS417_15525	0.17	+1.8
3,398,913	+		PS417_15525	0.17	-0.5
3,399,039	+		PS417_15525	0.31	+0.1
3,399,040	-		PS417_15525	0.32	+0.3
3,399,040	-		PS417_15525	0.32	-0.9
3,399,156	+		PS417_15525	0.45	+0.5
3,399,156	+		PS417_15525	0.45	+0.1
3,399,156	+		PS417_15525	0.45	-1.8
3,399,157	-		PS417_15525	0.45	-0.4
3,399,157	-		PS417_15525	0.45	+2.3
3,399,157	-		PS417_15525	0.45	+0.5
3,399,646	+				+0.5
3,399,825	+		PS417_15530	0.32	+1.0
3,399,826	-		PS417_15530	0.32	-0.1
3,399,826	-		PS417_15530	0.32	-1.2
3,399,826	-		PS417_15530	0.32	-0.7
3,399,928	+		PS417_15530	0.48	-0.5
3,399,929	-		PS417_15530	0.49	-0.3
3,400,053	+		PS417_15530	0.68	-0.6
3,400,065	-		PS417_15530	0.70	-3.8
3,400,076	+		PS417_15530	0.72	+0.5
3,400,077	-		PS417_15530	0.72	+0.0
3,400,077	-		PS417_15530	0.72	-1.1
3,400,286	+				-0.8
3,400,287	-				-1.2
3,400,287	-				+0.0
3,400,287	-				-0.2
3,400,287	-				-0.0
3,400,290	+				-0.4
3,400,316	+				-0.8
3,400,317	-				-1.4
3,400,692	+		PS417_15535	0.41	+0.2
3,400,692	+		PS417_15535	0.41	+0.3
3,400,734	+		PS417_15535	0.45	-1.2
3,401,026	-		PS417_15535	0.75	+2.2
3,401,059	-				-0.3
3,401,107	-		PS417_15535	0.83	-0.7
3,401,199	+				-0.6