Strain Fitness in Pseudomonas simiae WCS417 around PS417_15350

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
3,366,956	+		PS417_15340	0.74	-0.6
3,367,198	+				-0.1
3,367,239	+				-0.2
3,367,239	+				+1.2
3,367,239	+				-1.0
3,367,239	+				+1.0
3,367,239	+				-1.5
3,367,277	-				-0.4
3,367,304	+				+0.4
3,367,331	-		PS417_15345	0.11	+0.7
3,367,342	+		PS417_15345	0.13	-1.3
3,367,342	+		PS417_15345	0.13	-1.2
3,367,343	-				+1.3
3,367,343	-		PS417_15345	0.13	-0.0
3,367,374	+		PS417_15345	0.19	+0.3
3,367,586	+		PS417_15345	0.62	-0.3
3,367,598	+		PS417_15345	0.65	-0.9
3,367,704	+		PS417_15345	0.86	+0.3
3,367,705	-		PS417_15345	0.86	+0.5
3,367,705	-		PS417_15345	0.86	+0.2
3,367,860	+				+0.0
3,367,860	+				+0.5
3,367,881	-				+0.7
3,368,055	-		PS417_15350	0.15	+0.4
3,368,102	+		PS417_15350	0.19	+0.2
3,368,102	+				-0.5
3,368,102	+		PS417_15350	0.19	-1.4
3,368,102	+		PS417_15350	0.19	-1.4
3,368,102	+		PS417_15350	0.19	+0.5
3,368,103	-		PS417_15350	0.19	-0.9
3,368,103	-		PS417_15350	0.19	-1.5
3,368,189	+		PS417_15350	0.26	-0.7
3,368,189	+		PS417_15350	0.26	+1.0
3,368,190	-		PS417_15350	0.26	-0.5
3,368,289	-		PS417_15350	0.34	-1.0
3,368,289	-		PS417_15350	0.34	+0.4
3,368,612	-		PS417_15350	0.61	-0.5
3,368,743	-		PS417_15350	0.72	-0.7
3,368,743	-		PS417_15350	0.72	+0.0
3,368,867	-		PS417_15350	0.82	-1.5
3,369,090	-				+0.3
3,369,135	+				-0.7
3,369,136	-				+0.7
3,369,137	+				+0.3
3,369,163	-				-0.5
3,369,166	+				-1.4
3,369,166	+				-0.9
3,369,167	-				+2.9
3,369,167	-				-0.4
3,369,217	+				+0.1
3,369,217	+				-0.4
3,369,309	+		PS417_15355	0.12	-2.1
3,369,351	+		PS417_15355	0.17	+1.9
3,369,352	-		PS417_15355	0.17	-0.3
3,369,405	+		PS417_15355	0.24	+0.3
3,369,405	+		PS417_15355	0.24	+0.9
3,369,405	+		PS417_15355	0.24	-0.3
3,369,405	+		PS417_15355	0.24	-0.7
3,369,576	+		PS417_15355	0.45	+1.4
3,369,655	-		PS417_15355	0.55	+0.8
3,369,655	-		PS417_15355	0.55	+0.8
3,369,886	-		PS417_15355	0.83	+0.0
3,369,908	+		PS417_15355	0.86	+0.5
3,369,915	+		PS417_15355	0.86	-0.0
3,369,915	+		PS417_15355	0.86	+0.4
3,369,916	-		PS417_15355	0.87	-1.7