Strain Fitness in Pseudomonas simiae WCS417 around PS417_14265

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
3,120,216	+				-0.3
3,120,216	+				+0.3
3,120,216	+				-0.3
3,120,217	-				-0.1
3,120,245	+				+0.9
3,120,245	+				+0.3
3,120,245	+				-1.3
3,120,246	-				-0.1
3,120,246	-				-2.1
3,120,248	+				-0.9
3,120,267	+				+0.6
3,120,369	-		PS417_14260	0.14	-1.2
3,120,426	-		PS417_14260	0.20	-1.4
3,120,581	+		PS417_14260	0.38	+0.7
3,120,645	+		PS417_14260	0.45	-0.9
3,120,995	+		PS417_14260	0.84	+0.3
3,120,996	-				+0.5
3,121,122	+				-1.6
3,121,188	+				-1.3
3,121,225	+				-0.7
3,121,226	-				+0.2
3,121,338	+		PS417_14265	0.21	-0.4
3,121,339	-		PS417_14265	0.21	-0.2
3,121,339	-		PS417_14265	0.21	-1.7
3,121,672	+		PS417_14265	0.55	-1.3
3,121,672	+		PS417_14265	0.55	+0.3
3,121,673	-		PS417_14265	0.55	-0.6
3,121,690	+		PS417_14265	0.57	-2.2
3,121,851	-		PS417_14265	0.74	+2.6
3,121,993	-		PS417_14265	0.89	-0.8
3,122,045	+				+0.3
3,122,237	+				-0.9
3,122,237	+				+0.2
3,122,238	-				+2.3
3,122,238	-				-0.3
3,122,351	+		PS417_14270	0.17	+0.2
3,122,468	+		PS417_14270	0.28	-0.7
3,122,538	-		PS417_14270	0.35	+1.0
3,122,826	-		PS417_14270	0.63	-0.6
3,122,826	-		PS417_14270	0.63	-0.7
3,123,002	-		PS417_14270	0.80	-0.2
3,123,002	-		PS417_14270	0.80	-0.8
3,123,030	-				-1.3
3,123,030	-		PS417_14270	0.83	-1.2
3,123,030	-				+1.3
3,123,084	-		PS417_14270	0.88	+0.4