Strain Fitness in Pseudomonas simiae WCS417 around PS417_13695

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
3,012,730	+		PS417_13690	0.38	-2.0
3,012,730	+		PS417_13690	0.38	+0.2
3,012,730	+				-0.7
3,012,731	-				-0.3
3,012,800	+		PS417_13690	0.44	+2.1
3,012,810	+		PS417_13690	0.44	-2.2
3,012,810	+		PS417_13690	0.44	-0.5
3,012,811	-		PS417_13690	0.44	-2.2
3,012,811	-		PS417_13690	0.44	-0.1
3,012,910	-				-0.3
3,012,910	-				-0.3
3,012,910	-		PS417_13690	0.52	+0.1
3,012,919	+		PS417_13690	0.52	-0.5
3,012,921	+		PS417_13690	0.52	-1.1
3,012,921	+		PS417_13690	0.52	+0.7
3,012,922	-		PS417_13690	0.53	+1.3
3,013,023	+		PS417_13690	0.60	+0.3
3,013,023	+		PS417_13690	0.60	+1.3
3,013,028	+		PS417_13690	0.60	-0.1
3,013,028	+		PS417_13690	0.60	-2.5
3,013,029	-		PS417_13690	0.60	+0.4
3,013,619	+				-0.6
3,013,619	+				-0.1
3,013,619	+				+0.7
3,013,632	+				-1.5
3,013,633	-				-0.5
3,013,633	-				+0.4
3,013,633	-				+0.2
3,013,673	+				+0.3
3,013,677	+				+3.3
3,013,677	+				+0.7
3,013,677	+				-0.5
3,013,677	+				-0.1
3,013,677	+				+0.0
3,013,677	+				+1.3
3,013,678	-				-1.1
3,013,678	-				-0.5
3,013,678	-				-0.8
3,013,678	-				-0.7
3,013,678	-				-0.1
3,013,812	+		PS417_13695	0.10	-0.7
3,013,813	-		PS417_13695	0.10	+2.7
3,013,813	-		PS417_13695	0.10	-1.4
3,013,918	+				+0.7
3,013,920	+		PS417_13695	0.18	+0.2
3,013,920	+		PS417_13695	0.18	+0.3
3,013,920	+		PS417_13695	0.18	-0.5
3,013,953	+		PS417_13695	0.21	-0.2
3,013,953	+		PS417_13695	0.21	-0.4
3,013,954	-		PS417_13695	0.21	-0.5
3,013,954	-		PS417_13695	0.21	-1.0
3,014,088	+				+0.3
3,014,157	+		PS417_13695	0.36	-1.1
3,014,294	-		PS417_13695	0.47	+0.2
3,014,294	-		PS417_13695	0.47	-0.2
3,014,294	-		PS417_13695	0.47	-1.0
3,014,295	+		PS417_13695	0.47	-1.2
3,014,295	+		PS417_13695	0.47	-0.2
3,014,295	+		PS417_13695	0.47	+0.6
3,014,295	+		PS417_13695	0.47	-2.2
3,014,295	+		PS417_13695	0.47	-0.3
3,014,296	-		PS417_13695	0.47	-0.3
3,014,296	-		PS417_13695	0.47	+0.6
3,014,298	+		PS417_13695	0.47	-0.6
3,014,298	+		PS417_13695	0.47	-1.6
3,014,299	-		PS417_13695	0.47	-0.9
3,014,331	+		PS417_13695	0.50	+0.5
3,014,331	+		PS417_13695	0.50	+0.2
3,014,364	+		PS417_13695	0.52	-0.0
3,014,364	+		PS417_13695	0.52	-1.0
3,014,418	+		PS417_13695	0.56	-0.8
3,014,418	+		PS417_13695	0.56	+0.4
3,014,419	-				+0.9
3,014,419	-		PS417_13695	0.56	-0.7
3,014,419	-		PS417_13695	0.56	+0.7
3,014,422	+		PS417_13695	0.56	+0.0
3,014,740	-		PS417_13695	0.80	+1.3
3,014,856	+		PS417_13695	0.89	-0.5
3,014,859	+		PS417_13695	0.89	-1.0
3,014,860	-		PS417_13695	0.89	-3.0
3,014,860	-		PS417_13695	0.89	-0.8
3,014,975	+				+0.1
3,015,018	-				-0.3
3,015,070	-				+0.1
3,015,070	-				-0.4
3,015,107	+				-0.3
3,015,331	+				-1.2
3,015,332	-				-0.0
3,015,358	-				+2.3
3,015,365	+				+0.1
3,015,365	+				+0.3
3,015,366	-				-0.3
3,015,366	-				-0.4
3,015,413	-				+0.6
3,015,413	-				+0.3
3,015,413	-				-1.4
3,015,413	-				-0.1
3,015,413	-				+1.8
3,015,413	-				-3.4
3,015,414	+				-0.6
3,015,414	+				+0.5
3,015,414	+				+0.0
3,015,414	+				-0.4
3,015,414	+				+0.8
3,015,414	+				-2.2
3,015,414	+				+0.9
3,015,415	-				-0.0
3,015,415	-				-0.6
3,015,415	-				-0.3
3,015,415	-				+0.9
3,015,489	+		PS417_13705	0.15	+0.3
3,015,490	-		PS417_13705	0.15	-0.1
3,015,514	-		PS417_13705	0.18	-0.7
3,015,514	-		PS417_13705	0.18	+0.3
3,015,592	-		PS417_13705	0.27	+0.5
3,015,592	-		PS417_13705	0.27	-0.0
3,015,824	-		PS417_13705	0.54	+0.5