Strain Fitness in Pseudomonas simiae WCS417 around PS417_12400

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
2,697,391	-				-1.3
2,697,495	+				+0.3
2,697,495	+				+1.3
2,697,635	-				+1.3
2,698,040	+		PS417_12400	0.47	+1.3
2,698,108	-		PS417_12400	0.53	+2.0
2,698,346	+		PS417_12400	0.76	+1.2
2,698,347	-		PS417_12400	0.76	+2.5
2,698,347	-		PS417_12400	0.76	-1.2
2,698,347	-		PS417_12400	0.76	-0.6
2,698,425	-		PS417_12400	0.84	+0.3
2,698,555	+				+0.1
2,698,555	+				-1.2
2,698,556	-				+0.3
2,698,556	-				-0.2
2,698,596	+				+0.1
2,698,597	-				-0.0
2,698,774	+				-1.2
2,698,774	+				+1.0
2,698,929	+		PS417_12405	0.24	-0.3
2,698,929	+		PS417_12405	0.24	-0.3
2,698,930	-		PS417_12405	0.24	+0.2
2,698,930	-		PS417_12405	0.24	+0.1
2,699,454	-				+0.1
2,699,486	-				+0.4
2,699,486	-				-0.5
2,699,508	-				-0.2
2,699,508	-				-1.0
2,699,530	-				+0.9