Strain Fitness in Pseudomonas simiae WCS417 around PS417_12245

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
2,661,204	+		PS417_12240	0.57	-0.5
2,661,492	-		PS417_12240	0.69	-1.0
2,661,628	+		PS417_12240	0.75	-0.2
2,661,641	+		PS417_12240	0.76	-1.5
2,661,641	+		PS417_12240	0.76	+1.1
2,661,826	+		PS417_12240	0.84	-0.1
2,661,866	-		PS417_12240	0.86	-0.1
2,661,908	-		PS417_12240	0.88	+0.2
2,662,157	-				+0.5
2,662,157	-				-0.3
2,662,190	+				-0.1
2,662,190	+				-0.3
2,662,190	+				+0.3
2,662,216	-				+0.6
2,662,261	-		PS417_12245	0.10	-0.6
2,662,351	+		PS417_12245	0.27	-1.5
2,662,464	-		PS417_12245	0.47	-0.2
2,662,464	-		PS417_12245	0.47	-1.8
2,662,647	+		PS417_12245	0.80	-1.9
2,662,662	+				-0.3
2,662,755	+				-0.6
2,662,868	+		PS417_12250	0.13	+0.3
2,662,997	+		PS417_12250	0.27	-0.0
2,662,998	-		PS417_12250	0.27	+0.7
2,663,129	+		PS417_12250	0.41	-0.9
2,663,130	-		PS417_12250	0.42	+0.7
2,663,130	-		PS417_12250	0.42	-0.8
2,663,333	-		PS417_12250	0.64	-2.7
2,663,573	-		PS417_12250	0.90	+0.3
2,663,573	-		PS417_12250	0.90	-0.6
2,663,679	-				-0.7
2,663,679	-				-0.7
2,663,703	+				+1.5
2,663,703	+				-0.7
2,663,703	+				-0.1