Strain Fitness in Pseudomonas simiae WCS417 around PS417_12015

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
2,609,167	-		PS417_12005	0.33	-0.3
2,609,210	-		PS417_12005	0.42	+0.1
2,609,210	-		PS417_12005	0.42	+0.1
2,609,432	+		PS417_12005	0.87	-0.4
2,609,493	-				-0.6
2,609,842	+				+0.9
2,609,884	+				-0.9
2,610,229	+		PS417_12015	0.43	-2.7
2,610,230	-		PS417_12015	0.43	-0.2
2,610,270	-		PS417_12015	0.49	-0.8
2,610,619	+				-2.4
2,610,705	-				+0.5
2,610,716	-				-0.3
2,610,845	-				+0.6
2,610,885	+				+0.2
2,610,979	+		PS417_12020	0.15	+0.7
2,610,979	+		PS417_12020	0.15	+1.5
2,610,980	-		PS417_12020	0.15	-0.2
2,611,484	-		PS417_12020	0.64	-0.0