Strain Fitness in Pseudomonas simiae WCS417 around PS417_11950

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
2,599,523	-		PS417_11940	0.82	-0.5
2,599,902	+				+1.3
2,599,961	+				-0.5
2,599,962	-				+0.6
2,599,962	-				+0.2
2,600,317	+		PS417_11945	0.79	+0.3
2,600,352	+		PS417_11945	0.88	+1.3
2,600,352	+		PS417_11945	0.88	-0.0
2,600,530	+				+0.3
2,600,531	-				+1.7
2,600,531	-				-0.0
2,600,724	-		PS417_11950	0.53	-1.2
2,600,962	+				+0.7
2,601,102	-				+1.5
2,601,102	-				+1.0
2,601,104	-				-3.0
2,601,148	+				+1.2
2,601,162	-				-0.1
2,601,162	-				+0.5
2,601,165	+				+0.7
2,601,165	+				-0.6
2,601,166	-				+2.7
2,601,166	-				+0.4
2,601,210	-				+0.7
2,601,263	-				-2.2
2,601,263	-				-0.1
2,601,320	-				-0.9
2,601,339	+				-0.3
2,601,341	+				+1.0
2,601,341	+				+1.2
2,601,610	-				+0.3
2,601,647	-				-2.4
2,601,801	+				+0.3
2,601,801	+				+0.3
2,601,801	+				-0.0
2,601,802	-				+0.3