Strain Fitness in Pseudomonas simiae WCS417 around PS417_11120

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
2,382,969	+		PS417_11115	0.44	-0.7
2,383,086	+		PS417_11115	0.56	+1.5
2,383,087	-		PS417_11115	0.57	-0.5
2,383,105	-		PS417_11115	0.58	+0.1
2,383,112	+		PS417_11115	0.59	+0.0
2,383,113	-		PS417_11115	0.59	-2.0
2,383,323	+		PS417_11115	0.81	-0.3
2,383,323	+		PS417_11115	0.81	+2.6
2,383,404	+		PS417_11115	0.90	-1.1
2,383,404	+		PS417_11115	0.90	+0.3
2,384,166	+		PS417_11120	0.68	+0.0
2,384,167	-		PS417_11120	0.68	-0.2
2,384,181	-		PS417_11120	0.69	-1.5
2,384,312	+		PS417_11120	0.84	-0.9
2,384,316	-		PS417_11120	0.85	-1.3
2,384,449	+				+1.3
2,384,449	+				-0.4
2,384,450	-				+0.0
2,384,526	+				+1.3
2,384,549	-				-0.6
2,384,700	-		PS417_11125	0.14	-0.3
2,384,708	+		PS417_11125	0.16	+0.1
2,384,834	+		PS417_11125	0.41	-2.0
2,384,834	+		PS417_11125	0.41	-1.3
2,384,835	-		PS417_11125	0.41	-0.2
2,385,000	-		PS417_11125	0.74	+1.5
2,385,000	-		PS417_11125	0.74	-0.5
2,385,326	+				+0.2
2,385,327	-				-0.3
2,385,327	-				-0.1
2,385,327	-				+0.2