Strain Fitness in Pseudomonas simiae WCS417 around PS417_00100

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
20,997	-				+0.7
21,565	-				-0.0
21,565	-				-3.4
21,565	-				-1.8
21,565	-				-1.8
21,585	-				+1.7
21,675	-				+0.9
21,678	-				-0.8
21,678	-				+1.4
21,678	-				-1.9
21,720	-				+1.3
21,720	-				+3.3
21,856	+		PS417_00100	0.21	+0.7
21,856	+		PS417_00100	0.21	+3.7
21,857	-		PS417_00100	0.21	+0.8
21,857	-		PS417_00100	0.21	-1.0
21,857	-		PS417_00100	0.21	+1.5
21,953	+		PS417_00100	0.33	-0.3
21,973	+		PS417_00100	0.36	-0.7
21,998	+		PS417_00100	0.39	+1.3
21,998	+		PS417_00100	0.39	-0.0
21,998	+		PS417_00100	0.39	-1.0
21,999	-		PS417_00100	0.39	+1.9
22,170	+		PS417_00100	0.61	+0.5
22,382	-		PS417_00100	0.89	+0.6
22,468	+				+0.4
22,468	+				-0.4
22,473	-				+0.2
22,473	-				+1.7
22,481	-				+1.2
22,484	+				+1.2
22,484	+				-0.2
22,863	-				-0.2
23,317	+				+0.8
23,318	-				-1.3
23,318	-				-0.7
23,401	-				-0.2