Strain Fitness in Pseudomonas simiae WCS417 around PS417_08535

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
1,863,057	+				-0.2
1,863,058	-				+0.8
1,863,068	-				-1.0
1,863,068	-				+0.2
1,863,068	-				-0.0
1,863,264	+		PS417_08530	0.16	-0.1
1,863,264	+		PS417_08530	0.16	-0.5
1,863,299	+		PS417_08530	0.21	-0.6
1,863,300	-		PS417_08530	0.21	+0.1
1,863,498	-		PS417_08530	0.47	+0.4
1,863,498	-		PS417_08530	0.47	-1.6
1,863,498	-		PS417_08530	0.47	-2.3
1,863,498	-		PS417_08530	0.47	+0.6
1,863,500	-		PS417_08530	0.48	-0.4
1,863,569	+		PS417_08530	0.57	+1.0
1,863,569	+		PS417_08530	0.57	+1.3
1,863,570	-		PS417_08530	0.57	+0.4
1,863,719	+		PS417_08530	0.77	-0.5
1,863,795	+		PS417_08530	0.87	-0.0
1,863,894	-				-2.0
1,863,904	-				-0.1
1,863,907	+				-0.6
1,863,908	-				+1.5
1,863,908	-				-1.1
1,863,908	-				-0.2
1,863,908	-				-0.0
1,864,020	-				-0.1
1,864,176	+		PS417_08535	0.20	-0.9
1,864,176	+		PS417_08535	0.20	-0.6
1,864,177	-		PS417_08535	0.21	-1.1
1,864,746	+				-0.3
1,864,790	+				+0.5
1,864,871	+				-0.5
1,864,925	-				-0.4
1,864,925	-				-0.2
1,865,004	+				-2.2
1,865,004	+				-1.1
1,865,004	+				-1.7
1,865,036	+				-0.9
1,865,036	+				-0.4
1,865,215	+				-1.7