Strain Fitness in Pseudomonas simiae WCS417 around PS417_06870

Experiment: P. simiae ORA MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae ORA MOI 1
1,519,132	-		PS417_06865	0.23	-0.4
1,519,173	+		PS417_06865	0.28	-2.9
1,519,444	-		PS417_06865	0.58	-0.7
1,519,864	+				+0.8
1,519,865	-				+1.0
1,519,893	-				+0.7
1,520,127	-				+0.5
1,520,242	+				-0.9
1,520,243	-				-0.8
1,520,281	+				+0.4
1,520,281	+				+0.2
1,520,281	+				-0.5
1,520,282	-				-1.3
1,520,462	-		PS417_06870	0.16	+1.4
1,520,489	-		PS417_06870	0.17	+1.3
1,520,489	-		PS417_06870	0.17	+0.9
1,520,489	-		PS417_06870	0.17	+2.7
1,520,630	+				+0.5
1,520,631	-		PS417_06870	0.23	-0.1
1,520,809	+		PS417_06870	0.30	+1.3
1,520,809	+		PS417_06870	0.30	+0.7
1,520,809	+		PS417_06870	0.30	-1.7
1,520,965	+		PS417_06870	0.36	-1.4
1,520,965	+		PS417_06870	0.36	-0.8
1,520,965	+		PS417_06870	0.36	+0.5
1,521,078	-		PS417_06870	0.40	+0.6
1,521,121	+		PS417_06870	0.42	-0.0
1,521,121	+		PS417_06870	0.42	-1.1
1,521,142	+		PS417_06870	0.43	+0.3
1,521,142	+		PS417_06870	0.43	+0.6
1,521,143	-		PS417_06870	0.43	+0.9
1,521,143	-		PS417_06870	0.43	-0.2
1,521,143	-		PS417_06870	0.43	+0.0
1,521,364	+		PS417_06870	0.52	+0.9
1,521,364	+		PS417_06870	0.52	+0.1
1,521,365	-		PS417_06870	0.52	+0.3
1,521,365	-		PS417_06870	0.52	-0.3
1,521,406	+		PS417_06870	0.53	-0.1
1,521,406	+		PS417_06870	0.53	-0.1
1,521,406	+		PS417_06870	0.53	+0.5
1,521,794	-		PS417_06870	0.68	-1.3
1,522,045	-		PS417_06870	0.78	+0.5
1,522,303	+		PS417_06870	0.88	-0.8
1,522,303	+		PS417_06870	0.88	-0.2
1,522,304	-		PS417_06870	0.88	+0.6
1,522,304	-		PS417_06870	0.88	+1.3
1,522,304	-		PS417_06870	0.88	+0.2
1,522,534	-				-0.3
1,522,534	-				-0.4
1,522,544	+				-0.1
1,522,638	+				-2.5
1,522,638	+				-2.1
1,522,638	+				-0.3
1,522,638	+				-1.5
1,522,639	-				+0.4
1,522,643	-				+0.5
1,522,752	-				+0.1
1,523,301	+		PS417_06875	0.59	-1.3
1,523,302	-		PS417_06875	0.59	-1.1
1,523,302	-		PS417_06875	0.59	+0.3
1,523,302	-		PS417_06875	0.59	-0.4
1,523,370	+		PS417_06875	0.66	-1.2
1,523,371	-		PS417_06875	0.66	-0.2
1,523,371	-		PS417_06875	0.66	+1.1