Strain Fitness in Pseudomonas simiae WCS417 around PS417_07050

Experiment: P. simiae OR Antrim MOI 0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 0.1
1,555,466	+		PS417_07045	0.61	-0.6
1,555,466	+		PS417_07045	0.61	-2.2
1,555,466	+		PS417_07045	0.61	+0.2
1,555,467	-		PS417_07045	0.61	-1.8
1,555,502	+		PS417_07045	0.63	+0.0
1,555,554	+		PS417_07045	0.65	-1.6
1,555,554	+		PS417_07045	0.65	+0.5
1,555,555	-		PS417_07045	0.65	-0.7
1,555,584	+		PS417_07045	0.67	+0.1
1,555,584	+		PS417_07045	0.67	-0.5
1,555,584	+		PS417_07045	0.67	-0.4
1,555,585	-		PS417_07045	0.67	+1.1
1,555,585	-		PS417_07045	0.67	-1.1
1,555,710	+		PS417_07045	0.73	-0.1
1,555,710	+		PS417_07045	0.73	-0.2
1,555,711	-		PS417_07045	0.73	+0.3
1,555,821	+		PS417_07045	0.79	-1.6
1,555,821	+		PS417_07045	0.79	-0.1
1,555,902	-		PS417_07045	0.83	-0.7
1,555,932	+		PS417_07045	0.85	+0.2
1,555,932	+		PS417_07045	0.85	-1.4
1,555,932	+		PS417_07045	0.85	+3.7
1,555,932	+		PS417_07045	0.85	-0.1
1,555,932	+		PS417_07045	0.85	-0.3
1,555,932	+		PS417_07045	0.85	+0.4
1,555,933	-		PS417_07045	0.85	+1.4
1,555,933	-		PS417_07045	0.85	-1.5
1,555,933	-		PS417_07045	0.85	-1.4
1,555,933	-		PS417_07045	0.85	+0.3
1,555,933	-				+0.4
1,555,933	-		PS417_07045	0.85	+2.9
1,555,981	+		PS417_07045	0.87	+0.5
1,555,981	+		PS417_07045	0.87	-0.6
1,555,982	-		PS417_07045	0.87	+1.4
1,555,982	-		PS417_07045	0.87	+1.1
1,555,982	-		PS417_07045	0.87	+1.0
1,555,982	-		PS417_07045	0.87	-0.2
1,556,007	-		PS417_07045	0.88	+0.6
1,556,007	-		PS417_07045	0.88	+0.9
1,556,014	+		PS417_07045	0.89	-1.2
1,556,014	+		PS417_07045	0.89	+1.4
1,556,014	+		PS417_07045	0.89	-0.2
1,556,015	-		PS417_07045	0.89	+0.8
1,556,015	-		PS417_07045	0.89	-1.0
1,556,015	-		PS417_07045	0.89	+1.4
1,556,064	+				-1.2
1,556,064	+				-0.3
1,556,064	+				-1.9
1,556,065	-				-0.9
1,556,066	+				-0.3
1,556,067	-				+2.2
1,556,067	-				+0.8
1,556,089	-				-0.6
1,556,192	+				+0.2
1,556,290	+				-0.3
1,556,290	+				-0.5
1,556,290	+				-0.5
1,556,290	+				-0.2
1,556,290	+				-1.2
1,556,290	+				+0.0
1,556,291	-				-0.7
1,556,291	-				-1.4
1,556,291	-				+0.8
1,556,291	-				-1.6
1,556,291	-				-1.6
1,556,313	+				-0.4
1,556,314	-				-0.1
1,556,325	+				+0.0
1,556,379	+				+1.4
1,556,380	-				-0.4
1,556,409	+				-2.2
1,556,413	+				+0.5
1,556,414	-				+2.4
1,556,426	-				+1.5
1,556,441	+				-0.6
1,556,483	+				+0.0
1,556,484	-				-0.7
1,556,485	+				+2.4
1,556,485	+				-0.5
1,556,485	+				-0.9
1,556,511	+				-1.1
1,556,511	+				-2.1
1,556,512	-				+1.3
1,556,512	-				-0.2
1,556,583	+				+0.8
1,556,584	-				+0.8
1,556,607	+				+0.4
1,556,607	+				-1.0
1,556,607	+				-1.1
1,556,607	+				-0.1
1,556,607	+				-0.2
1,556,607	+				+0.1
1,556,685	-		PS417_07050	0.11	+1.0
1,556,696	+		PS417_07050	0.11	+0.6
1,556,696	+		PS417_07050	0.11	-0.2
1,556,696	+		PS417_07050	0.11	-1.4
1,556,696	+		PS417_07050	0.11	-0.2
1,556,697	-		PS417_07050	0.12	-0.3
1,556,790	+		PS417_07050	0.16	+3.1
1,556,791	-		PS417_07050	0.16	-1.1
1,556,897	+		PS417_07050	0.20	+3.0
1,556,897	+		PS417_07050	0.20	-0.6
1,557,148	+		PS417_07050	0.31	-0.5
1,557,148	+		PS417_07050	0.31	-1.4
1,557,185	+		PS417_07050	0.33	+0.3
1,557,186	-		PS417_07050	0.33	+0.4
1,557,186	-		PS417_07050	0.33	-0.2
1,557,186	-		PS417_07050	0.33	-0.2
1,557,504	+		PS417_07050	0.47	-0.6
1,557,504	+		PS417_07050	0.47	-1.8
1,557,504	+		PS417_07050	0.47	+1.8
1,557,504	+		PS417_07050	0.47	+0.3
1,557,504	+		PS417_07050	0.47	+2.0
1,557,504	+		PS417_07050	0.47	-0.4
1,557,505	-		PS417_07050	0.47	+1.2
1,557,505	-		PS417_07050	0.47	+0.3
1,557,506	+		PS417_07050	0.47	-0.2
1,557,542	+		PS417_07050	0.48	-1.5
1,557,543	-		PS417_07050	0.48	+2.5
1,557,596	-		PS417_07050	0.51	+0.6
1,557,596	-		PS417_07050	0.51	-3.5
1,557,735	-		PS417_07050	0.57	+0.8
1,557,738	+		PS417_07050	0.57	-0.8
1,557,738	+		PS417_07050	0.57	+0.8
1,557,738	+		PS417_07050	0.57	-0.3
1,557,739	-		PS417_07050	0.57	+0.1
1,557,739	-		PS417_07050	0.57	-0.1
1,557,739	-		PS417_07050	0.57	-1.1
1,557,745	-		PS417_07050	0.57	+0.1
1,557,780	+		PS417_07050	0.59	+1.2
1,557,945	+		PS417_07050	0.66	+0.7
1,557,957	+		PS417_07050	0.66	+2.1
1,557,958	-		PS417_07050	0.67	+0.8
1,557,958	-		PS417_07050	0.67	-0.1
1,557,958	-		PS417_07050	0.67	+1.9
1,557,991	-		PS417_07050	0.68	-0.1
1,558,134	+		PS417_07050	0.74	+0.6
1,558,135	-		PS417_07050	0.74	+0.1
1,558,137	+		PS417_07050	0.74	+0.4
1,558,137	+				+0.8
1,558,137	+		PS417_07050	0.74	-1.4
1,558,137	+		PS417_07050	0.74	+0.9
1,558,138	-		PS417_07050	0.74	-0.8
1,558,182	+		PS417_07050	0.76	-0.1
1,558,183	-		PS417_07050	0.76	-0.5
1,558,329	+		PS417_07050	0.83	+0.5
1,558,330	-		PS417_07050	0.83	+0.4
1,558,384	-		PS417_07050	0.85	-0.7
1,558,384	-		PS417_07050	0.85	-2.4
1,558,613	-				+0.4
1,558,855	+				+1.0
1,558,862	-				+0.9
1,558,890	+				+0.8
1,558,890	+				+1.0
1,558,890	+				-0.6
1,558,914	+				+1.1
1,558,915	-				-0.0
1,558,990	+				-1.2
1,559,038	+				-1.9
1,559,038	+				-1.2
1,559,038	+				-0.1
1,559,039	-				+4.9
1,559,041	-				-0.4
1,559,042	+				-0.8
1,559,042	+				+1.4
1,559,127	+				-1.2
1,559,273	+				-0.5
1,559,325	+				-0.3
1,559,327	+				+0.1
1,559,440	+				-0.0
1,559,495	-				+0.3
1,559,526	-				-2.2
1,559,643	+		PS417_07055	0.12	-0.8
1,559,692	+		PS417_07055	0.14	+1.1
1,559,692	+		PS417_07055	0.14	+0.1