Strain Fitness in Pseudomonas simiae WCS417 around PS417_04770

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,056,716	+		PS417_04765	0.28	+1.3
1,056,716	+		PS417_04765	0.28	-0.4
1,056,717	-		PS417_04765	0.28	-0.0
1,056,909	-		PS417_04765	0.44	+2.4
1,056,927	+		PS417_04765	0.46	-1.4
1,056,928	-		PS417_04765	0.46	+3.6
1,057,077	+				-0.4
1,057,078	-		PS417_04765	0.59	+0.0
1,057,078	-		PS417_04765	0.59	-1.4
1,057,154	+		PS417_04765	0.65	+1.4
1,057,259	+		PS417_04765	0.74	-0.6
1,057,874	+				+0.6
1,057,874	+		PS417_04770	0.23	-0.1
1,057,875	-		PS417_04770	0.23	-3.6
1,057,875	-		PS417_04770	0.23	-0.5
1,057,967	-		PS417_04770	0.34	-0.1
1,058,052	+		PS417_04770	0.43	-0.6
1,058,203	+		PS417_04770	0.61	-0.8
1,058,204	-		PS417_04770	0.61	-0.9
1,058,294	+		PS417_04770	0.72	-1.1
1,058,466	-				+1.6
1,058,680	+		PS417_04775	0.18	+1.7
1,058,680	+				+1.6
1,058,680	+		PS417_04775	0.18	+0.2
1,058,680	+		PS417_04775	0.18	+0.1
1,058,681	-		PS417_04775	0.18	-0.8
1,058,681	-		PS417_04775	0.18	-0.9
1,058,681	-		PS417_04775	0.18	+0.6