Strain Fitness in Pseudomonas simiae WCS417 around PS417_04730

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,047,982	-				-0.8
1,048,085	+		PS417_04725	0.17	-0.5
1,048,085	+		PS417_04725	0.17	+0.2
1,048,085	+		PS417_04725	0.17	-1.6
1,048,086	-		PS417_04725	0.17	+0.5
1,048,423	+		PS417_04725	0.54	-0.8
1,048,423	+		PS417_04725	0.54	-1.1
1,048,546	+		PS417_04725	0.68	+3.1
1,048,546	+		PS417_04725	0.68	-0.3
1,048,546	+		PS417_04725	0.68	+0.4
1,048,547	-		PS417_04725	0.68	+0.4
1,048,789	-				-0.5
1,048,831	-				+2.0
1,048,868	+				-0.7
1,048,868	+				+0.1
1,048,868	+				+0.1
1,048,868	+				+0.3
1,048,868	+				+0.8
1,048,869	-				-0.4
1,048,869	-				-0.2
1,048,869	-				+1.3
1,048,869	-				+1.3
1,048,869	-				-1.1
1,049,147	+		PS417_04730	0.19	-0.1
1,049,147	+		PS417_04730	0.19	-0.8
1,049,147	+		PS417_04730	0.19	-0.7
1,049,147	+		PS417_04730	0.19	-0.3
1,049,148	-		PS417_04730	0.19	-0.4
1,049,696	+		PS417_04730	0.75	+0.1
1,049,696	+		PS417_04730	0.75	-1.0
1,049,696	+		PS417_04730	0.75	+0.1
1,049,697	-		PS417_04730	0.76	-1.4
1,049,697	-		PS417_04730	0.76	-0.8
1,049,752	+		PS417_04730	0.81	-0.4
1,049,753	-		PS417_04730	0.81	-1.6
1,050,103	-				-1.0
1,050,160	-		PS417_04735	0.10	+0.6
1,050,207	+		PS417_04735	0.15	+0.6
1,050,207	+				+1.6
1,050,208	-		PS417_04735	0.15	+0.3
1,050,240	+		PS417_04735	0.19	-0.4
1,050,240	+		PS417_04735	0.19	-0.4
1,050,241	-		PS417_04735	0.19	-2.3
1,050,241	-		PS417_04735	0.19	+2.1
1,050,513	+		PS417_04735	0.47	+0.5
1,050,540	+		PS417_04735	0.50	+1.7
1,050,540	+		PS417_04735	0.50	-2.0
1,050,544	+		PS417_04735	0.50	+2.6
1,050,545	-		PS417_04735	0.50	-0.6
1,050,545	-		PS417_04735	0.50	-0.0
1,050,545	-		PS417_04735	0.50	+0.4
1,050,834	+		PS417_04735	0.80	-0.0
1,050,835	-		PS417_04735	0.80	+0.1